Cow genome map
| Conread name: | Lng1-LNG010028B09 |
| Conread position: | 1-450 |
| Cow position: | chr11:2834807-2835241 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 1-450 |
| Cow position: | chr11:49551477-49551038 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 1-453 |
| Cow position: | chr11:14734849-14734410 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 109 |
| Conread position: | 1-458 |
| Cow position: | chr11:40486693-40487138 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 40 |
| Conread position: | 1-468 |
| Cow position: | chr11:41600157-41599693 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 110 |
| Conread position: | 1-474 |
| Cow position: | chr11:13045209-13044769 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 190, 110 |
| Conread position: | 1-476 |
| Cow position: | chr11:60757442-60756976 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 34 |
| Conread position: | 3-454 |
| Cow position: | chr11:25809210-25808766 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 3-458 |
| Cow position: | chr11:21729472-21729035 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 73 |
| Conread position: | 3-465 |
| Cow position: | chr11:8266348-8266807 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 48 |
| Conread position: | 3-473 |
| Cow position: | chr11:417920-417473 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 47 |
| Conread position: | 3-473 |
| Cow position: | chr11:15835454-15835912 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr11:19061541-19061074 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr11:35142798-35142332 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr11:44580697-44580233 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 108 |
| Conread position: | 3-476 |
| Cow position: | chr11:31865151-31865636 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 3-476 |
| Cow position: | chr11:74928333-74928806 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 26-453 |
| Cow position: | chr11:62575416-62575005 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 112-458 |
| Cow position: | chr11:58805178-58804837 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 112-458 |
| Cow position: | chr11:73513723-73513387 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 130-475 |
| Cow position: | chr11:15995140-15995496 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 154-458 |
| Cow position: | chr11:10365709-10365411 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 186-450 |
| Cow position: | chr11:43362000-43361742 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 101 |
| Conread position: | 199-474 |
| Cow position: | chr11:24600716-24600992 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 89 |
| Conread position: | 216-478 |
| Cow position: | chr11:25759496-25759757 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 71 |
| Conread position: | 225-453 |
| Cow position: | chr11:19271510-19271285 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 62 |
| Conread position: | 240-473 |
| Cow position: | chr11:17782260-17782027 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 47 |
| Conread position: | 257-473 |
| Cow position: | chr11:13062623-13062407 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 279-442 |
| Cow position: | chr11:24873166-24873005 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 141 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 283-475 |
| Cow position: | chr11:18105877-18105689 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 309-473 |
| Cow position: | chr11:15988123-15988288 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 329-473 |
| Cow position: | chr11:38069151-38069296 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 331-476 |
| Cow position: | chr11:30164429-30164575 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 335-467 |
| Cow position: | chr11:68130272-68130406 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 337-473 |
| Cow position: | chr11:45155884-45155747 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 350-465 |
| Cow position: | chr11:32762329-32762444 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.