Cow genome map
Conread name: | Lng1-LNG010028B09 |
Conread position: | 1-450 |
Cow position: | chr16:48104238-48104663 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 50 |
Conread position: | 1-468 |
Cow position: | chr16:51040686-51041143 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 22 |
Conread position: | 1-473 |
Cow position: | chr16:25344110-25344580 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 66 |
Conread position: | 1-473 |
Cow position: | chr16:41033434-41033900 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 22 |
Conread position: | 1-474 |
Cow position: | chr16:18694836-18694370 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 100 |
Conread position: | 3-465 |
Cow position: | chr16:3010970-3011431 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 67 |
Conread position: | 3-472 |
Cow position: | chr16:658094-658560 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 103 |
Conread position: | 3-473 |
Cow position: | chr16:417028-417496 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 48 |
Conread position: | 3-473 |
Cow position: | chr16:20642622-20643089 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 50 |
Conread position: | 3-473 |
Cow position: | chr16:28168184-28167717 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 64 |
Conread position: | 4-443 |
Cow position: | chr16:44127704-44127285 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 18 |
Conread position: | 4-473 |
Cow position: | chr16:47772397-47772865 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 107 |
Conread position: | 16-462 |
Cow position: | chr16:26990792-26990350 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 51 |
Conread position: | 55-473 |
Cow position: | chr16:7154788-7155205 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 54 |
Conread position: | 95-474 |
Cow position: | chr16:18425627-18426008 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 142 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 308, 246 |
Conread position: | 112-473 |
Cow position: | chr16:24241161-24240799 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 176 |
Conread position: | 117-473 |
Cow position: | chr16:53226073-53225719 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 130 |
Conread position: | 117-475 |
Cow position: | chr16:47367242-47367589 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 106 |
Conread position: | 137-450 |
Cow position: | chr16:10860061-10859749 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 151 |
Conread position: | 139-453 |
Cow position: | chr16:4398515-4398838 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 149 |
Conread position: | 158-473 |
Cow position: | chr16:18651296-18650983 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 129 |
Conread position: | 172-468 |
Cow position: | chr16:5416967-5416680 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 213 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 174, 103 |
Conread position: | 174-472 |
Cow position: | chr16:7303058-7303356 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 113 |
Conread position: | 205-473 |
Cow position: | chr16:36246810-36247072 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 68 |
Conread position: | 210-473 |
Cow position: | chr16:26499999-26500262 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 79 |
Conread position: | 230-473 |
Cow position: | chr16:13722231-13721988 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 12 |
Conread position: | 232-473 |
Cow position: | chr16:44147613-44147856 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 55 |
Conread position: | 280-474 |
Cow position: | chr16:28268308-28268114 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 156 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 66, 173 |
Conread position: | 290-473 |
Cow position: | chr16:7457565-7457381 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 154 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 307-454 |
Cow position: | chr16:27012836-27012983 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 119 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 40, 139 |
Conread position: | 350-476 |
Cow position: | chr16:50190636-50190510 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.