Cow genome map
| Conread name: | Lng1-LNG010028B09 |
| Conread position: | 1-473 |
| Cow position: | chr2:35884108-35883635 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 110 |
| Conread position: | 1-474 |
| Cow position: | chr2:20351590-20351128 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 1-474 |
| Cow position: | chr2:43877091-43877555 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 41 |
| Conread position: | 2-450 |
| Cow position: | chr2:4018214-4017782 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 2-469 |
| Cow position: | chr2:36059079-36058615 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 109 |
| Conread position: | 2-469 |
| Cow position: | chr2:48360305-48360777 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 3-465 |
| Cow position: | chr2:43757275-43756816 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-472 |
| Cow position: | chr2:6965294-6965759 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-472 |
| Cow position: | chr2:62730893-62731357 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr2:575925-576391 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 3-473 |
| Cow position: | chr2:4451682-4451216 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 3-473 |
| Cow position: | chr2:4917702-4917235 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr2:9962703-9962236 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 3-473 |
| Cow position: | chr2:39424299-39424762 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr2:77858696-77859158 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 3-476 |
| Cow position: | chr2:2410474-2410005 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 5-473 |
| Cow position: | chr2:6004465-6004002 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 14-457 |
| Cow position: | chr2:23492179-23492611 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 14 |
| Conread position: | 15-473 |
| Cow position: | chr2:18021534-18021077 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 18-458 |
| Cow position: | chr2:383736-383305 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 48 |
| Conread position: | 39-473 |
| Cow position: | chr2:52128917-52128500 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 72 |
| Conread position: | 86-459 |
| Cow position: | chr2:34502219-34502581 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 100-473 |
| Cow position: | chr2:31410418-31410047 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 152 |
| Conread position: | 112-460 |
| Cow position: | chr2:10657363-10657027 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 112-475 |
| Cow position: | chr2:2772199-2772566 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 112 |
| Conread position: | 114-475 |
| Cow position: | chr2:73992198-73992561 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 146 |
| Conread position: | 132-474 |
| Cow position: | chr2:53030583-53030927 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 145-476 |
| Cow position: | chr2:44987917-44987584 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 144 |
| Conread position: | 159-450 |
| Cow position: | chr2:56798799-56798512 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 51 |
| Conread position: | 184-453 |
| Cow position: | chr2:11694888-11695151 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 161, 98 |
| Conread position: | 199-451 |
| Cow position: | chr2:36996933-36997185 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 88 |
| Conread position: | 201-475 |
| Cow position: | chr2:62819918-62819642 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 217-465 |
| Cow position: | chr2:9187300-9187054 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 225-473 |
| Cow position: | chr2:30816142-30815897 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 67 |
| Conread position: | 230-458 |
| Cow position: | chr2:63058624-63058859 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 111, 58 |
| Conread position: | 232-457 |
| Cow position: | chr2:53174919-53175141 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 237-473 |
| Cow position: | chr2:24927983-24928217 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 266-473 |
| Cow position: | chr2:78301763-78301561 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 275-465 |
| Cow position: | chr2:52160012-52159822 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 286-468 |
| Cow position: | chr2:13603010-13603190 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 296-450 |
| Cow position: | chr2:38375825-38375981 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 297-474 |
| Cow position: | chr2:25991950-25992124 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 308-458 |
| Cow position: | chr2:32417953-32417802 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 330-458 |
| Cow position: | chr2:30909190-30909319 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 330-471 |
| Cow position: | chr2:12935542-12935402 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 352-473 |
| Cow position: | chr2:9956517-9956396 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.