Cow genome map
| Conread name: | Lng1-LNG010036C05 |
| Conread position: | 2-171 |
| Cow position: | chr11:35580341-35580175 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 3-168 |
| Cow position: | chr11:31410798-31410963 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-169 |
| Cow position: | chr11:17721722-17721885 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-171 |
| Cow position: | chr11:42159977-42160143 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 63 |
| Conread position: | 3-171 |
| Cow position: | chr11:44032091-44031919 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 3-171 |
| Cow position: | chr11:52380792-52380956 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 3-178 |
| Cow position: | chr11:11558251-11558078 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 3-179 |
| Cow position: | chr11:10213489-10213656 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-179 |
| Cow position: | chr11:24599309-24599482 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 170, 11 |
| Conread position: | 3-180 |
| Cow position: | chr11:17036448-17036623 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 168, 142 |
| Conread position: | 3-181 |
| Cow position: | chr11:23128460-23128637 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 169, 142 |
| Conread position: | 3-181 |
| Cow position: | chr11:29960375-29960201 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 167, 59 |
| Conread position: | 3-181 |
| Cow position: | chr11:69119373-69119197 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 169, 123 |
| Conread position: | 3-182 |
| Cow position: | chr11:2917507-2917681 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 169, 14 |
| Conread position: | 3-182 |
| Cow position: | chr11:26845514-26845690 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 171, 123 |
| Conread position: | 3-182 |
| Cow position: | chr11:27248570-27248397 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 169, 63 |
| Conread position: | 3-182 |
| Cow position: | chr11:34646669-34646496 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 3-182 |
| Cow position: | chr11:39499436-39499262 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 134, 143 |
| Conread position: | 3-182 |
| Cow position: | chr11:50152734-50152911 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 170, 147 |
| Conread position: | 3-182 |
| Cow position: | chr11:55494759-55494584 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-182 |
| Cow position: | chr11:67614842-67615024 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 123 |
| Conread position: | 3-182 |
| Cow position: | chr11:80556299-80556125 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 163, 63 |
| Conread position: | 3-182 |
| Cow position: | chr11:80923244-80923419 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 169, 59 |
| Conread position: | 3-183 |
| Cow position: | chr11:62812870-62813046 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-185 |
| Cow position: | chr11:16342149-16342327 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-190 |
| Cow position: | chr11:35803216-35803033 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 4-178 |
| Cow position: | chr11:20238755-20238582 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 4-182 |
| Cow position: | chr11:45646515-45646690 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 169, 51 |
| Conread position: | 4-182 |
| Cow position: | chr11:47772311-47772488 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 168, 137 |
| Conread position: | 4-183 |
| Cow position: | chr11:6194284-6194109 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 168, 124 |
| Conread position: | 4-183 |
| Cow position: | chr11:63999013-63999186 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 163, 89 |
| Conread position: | 5-182 |
| Cow position: | chr11:44636676-44636853 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 138 |
| Conread position: | 7-178 |
| Cow position: | chr11:69392637-69392472 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 8-182 |
| Cow position: | chr11:47545206-47545035 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 167, 57 |
| Conread position: | 9-137 |
| Cow position: | chr11:36328961-36329090 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 9-177 |
| Cow position: | chr11:34121273-34121106 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 127 |
| Conread position: | 14-171 |
| Cow position: | chr11:10620259-10620413 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 121 |
| Conread position: | 14-180 |
| Cow position: | chr11:30830545-30830709 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 158, 111 |
| Conread position: | 19-174 |
| Cow position: | chr11:54218778-54218631 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.