Cow genome map
| Conread name: | Lng1-LNG010036C05 |
| Conread position: | 3-123 |
| Cow position: | chr16:17291924-17292044 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-127 |
| Cow position: | chr16:1582828-1582952 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 3-133 |
| Cow position: | chr16:42078750-42078879 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-140 |
| Cow position: | chr16:33235066-33235199 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-171 |
| Cow position: | chr16:11134883-11135047 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 3-171 |
| Cow position: | chr16:17945619-17945455 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 3-171 |
| Cow position: | chr16:45678076-45677913 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-171 |
| Cow position: | chr16:48398156-48398321 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-173 |
| Cow position: | chr16:54679763-54679602 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-176 |
| Cow position: | chr16:42977565-42977393 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 144 |
| Conread position: | 3-178 |
| Cow position: | chr16:50370692-50370524 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 99 |
| Conread position: | 3-180 |
| Cow position: | chr16:25839718-25839545 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-182 |
| Cow position: | chr16:4626293-4626469 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 123, 145 |
| Conread position: | 3-182 |
| Cow position: | chr16:4857004-4857179 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 169, 63 |
| Conread position: | 3-182 |
| Cow position: | chr16:17903547-17903727 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 169, 146 |
| Conread position: | 3-182 |
| Cow position: | chr16:21040125-21039950 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-182 |
| Cow position: | chr16:25170491-25170316 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 3-182 |
| Cow position: | chr16:25387071-25386897 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 164, 56 |
| Conread position: | 3-182 |
| Cow position: | chr16:33704903-33704729 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 172, 76 |
| Conread position: | 3-182 |
| Cow position: | chr16:40514384-40514558 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 169, 123 |
| Conread position: | 3-182 |
| Cow position: | chr16:41578324-41578148 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 116 |
| Conread position: | 3-182 |
| Cow position: | chr16:45554541-45554365 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 125 |
| Conread position: | 3-195 |
| Cow position: | chr16:9985295-9985487 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 133, 144 |
| Conread position: | 4-182 |
| Cow position: | chr16:9905187-9905013 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 168, 124 |
| Conread position: | 5-124 |
| Cow position: | chr16:17460264-17460144 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 5-182 |
| Cow position: | chr16:11105650-11105475 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 168, 137 |
| Conread position: | 8-169 |
| Cow position: | chr16:45294638-45294480 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 8-181 |
| Cow position: | chr16:31122157-31122330 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 118, 92 |
| Conread position: | 12-182 |
| Cow position: | chr16:30305726-30305892 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 160, 54 |
| Conread position: | 14-147 |
| Cow position: | chr16:11791097-11790967 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 14-169 |
| Cow position: | chr16:56231914-56231764 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 14-181 |
| Cow position: | chr16:29527916-29527749 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-182 |
| Cow position: | chr16:34220273-34220106 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 158, 114 |
Show alignments to all cow chromosomes.