Cow genome map
| Conread name: | Lng1-LNG010036C05 |
| Conread position: | 3-124 |
| Cow position: | chr2:15694303-15694183 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-124 |
| Cow position: | chr2:37619816-37619937 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-141 |
| Cow position: | chr2:50449812-50449948 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-166 |
| Cow position: | chr2:46052597-46052439 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 3-167 |
| Cow position: | chr2:38362268-38362428 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-167 |
| Cow position: | chr2:46162055-46161894 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-171 |
| Cow position: | chr2:10439937-10439772 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 133 |
| Conread position: | 3-171 |
| Cow position: | chr2:33554072-33554236 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 3-171 |
| Cow position: | chr2:38640421-38640250 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-171 |
| Cow position: | chr2:40466733-40466570 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 3-178 |
| Cow position: | chr2:44222922-44222751 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 3-180 |
| Cow position: | chr2:45499104-45499275 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 3-181 |
| Cow position: | chr2:40402929-40403104 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 3-181 |
| Cow position: | chr2:43790198-43790023 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 169, 123 |
| Conread position: | 3-182 |
| Cow position: | chr2:994267-994442 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 168, 121 |
| Conread position: | 3-182 |
| Cow position: | chr2:1638701-1638525 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 172, 60 |
| Conread position: | 3-182 |
| Cow position: | chr2:13001894-13001725 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 169, 56 |
| Conread position: | 3-182 |
| Cow position: | chr2:13684798-13684620 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 130 |
| Conread position: | 3-182 |
| Cow position: | chr2:18997817-18997648 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 169, 105 |
| Conread position: | 3-182 |
| Cow position: | chr2:19494312-19494134 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 171, 123 |
| Conread position: | 3-182 |
| Cow position: | chr2:30911419-30911244 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-182 |
| Cow position: | chr2:36055701-36055876 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-182 |
| Cow position: | chr2:40257314-40257492 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 165, 125 |
| Conread position: | 3-182 |
| Cow position: | chr2:41248669-41248490 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 165, 123 |
| Conread position: | 3-182 |
| Cow position: | chr2:44191577-44191401 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 172, 5 |
| Conread position: | 3-182 |
| Cow position: | chr2:45642389-45642567 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 3-182 |
| Cow position: | chr2:46188998-46189175 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 169, 128 |
| Conread position: | 3-182 |
| Cow position: | chr2:46331163-46330983 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 3-182 |
| Cow position: | chr2:46968094-46968268 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 169, 59 |
| Conread position: | 3-182 |
| Cow position: | chr2:47015238-47015412 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 169, 72 |
| Conread position: | 3-182 |
| Cow position: | chr2:58035205-58035029 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 3-182 |
| Cow position: | chr2:69747518-69747696 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 171, 122 |
| Conread position: | 3-182 |
| Cow position: | chr2:72183394-72183572 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 167, 123 |
| Conread position: | 3-182 |
| Cow position: | chr2:75600820-75600647 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 169, 123 |
| Conread position: | 3-183 |
| Cow position: | chr2:17114632-17114810 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 140, 90 |
| Conread position: | 4-182 |
| Cow position: | chr2:827514-827691 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 171, 135 |
| Conread position: | 4-182 |
| Cow position: | chr2:7573408-7573580 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-182 |
| Cow position: | chr2:38747756-38747582 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 165, 121 |
| Conread position: | 5-147 |
| Cow position: | chr2:50905614-50905756 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-182 |
| Cow position: | chr2:46033431-46033255 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 167, 123 |
| Conread position: | 5-182 |
| Cow position: | chr2:46190882-46191052 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 7-171 |
| Cow position: | chr2:13672615-13672460 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-182 |
| Cow position: | chr2:30144810-30144639 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 161, 60 |
| Conread position: | 8-165 |
| Cow position: | chr2:44217816-44217967 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 8-182 |
| Cow position: | chr2:70704351-70704178 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 164, 116 |
| Conread position: | 9-171 |
| Cow position: | chr2:24434188-24434346 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 9-176 |
| Cow position: | chr2:25448420-25448256 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 14-182 |
| Cow position: | chr2:39798329-39798162 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 158, 112 |
| Conread position: | 14-182 |
| Cow position: | chr2:57733521-57733352 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 126, 110 |
| Conread position: | 22-171 |
| Cow position: | chr2:53650103-53649958 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 36-182 |
| Cow position: | chr2:47147974-47147831 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 90 |
Show alignments to all cow chromosomes.