Cow genome map


           Conread name:
           Lng1-LNG010036C05
        

               Conread position:
               2-178
               

               Cow position:
               chr27:22171158-22171328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-121
               

               Cow position:
               chr27:788938-788820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-171
               

               Cow position:
               chr27:4672871-4673040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 127
               

               Conread position:
               3-178
               

               Cow position:
               chr27:23108041-23107873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               3-179
               

               Cow position:
               chr27:19685854-19685680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               169, 142
               

               Conread position:
               3-180
               

               Cow position:
               chr27:426829-427000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               169, 65
               

               Conread position:
               4-134
               

               Cow position:
               chr27:15003118-15002987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               14-182
               

               Cow position:
               chr27:16625770-16625932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 53
               
Show alignments to all cow chromosomes.