Cow genome map
| Conread name: | Lng1-LNG010036C05 |
| Conread position: | 3-167 |
| Cow position: | chr3:64196899-64196739 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-171 |
| Cow position: | chr3:9641641-9641477 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 3-171 |
| Cow position: | chr3:31350031-31350194 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 3-171 |
| Cow position: | chr3:49328017-49327853 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 3-171 |
| Cow position: | chr3:62789102-62789268 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 143 |
| Conread position: | 3-171 |
| Cow position: | chr3:69785551-69785715 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 124 |
| Conread position: | 3-177 |
| Cow position: | chr3:7337711-7337878 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 3-178 |
| Cow position: | chr3:3472113-3471942 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 119, 101 |
| Conread position: | 3-178 |
| Cow position: | chr3:3883743-3883914 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-178 |
| Cow position: | chr3:59610645-59610818 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 169, 142 |
| Conread position: | 3-180 |
| Cow position: | chr3:44932586-44932413 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 3-180 |
| Cow position: | chr3:55835748-55835924 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 157, 123 |
| Conread position: | 3-181 |
| Cow position: | chr3:70609699-70609524 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 126, 49 |
| Conread position: | 3-182 |
| Cow position: | chr3:17331795-17331625 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 127, 57 |
| Conread position: | 3-182 |
| Cow position: | chr3:19585936-19585760 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 165, 60 |
| Conread position: | 3-182 |
| Cow position: | chr3:23408285-23408453 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 165, 63 |
| Conread position: | 3-182 |
| Cow position: | chr3:26874663-26874491 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 169, 78 |
| Conread position: | 3-182 |
| Cow position: | chr3:54946204-54946027 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 169, 128 |
| Conread position: | 3-182 |
| Cow position: | chr3:55177673-55177852 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 171, 136 |
| Conread position: | 3-182 |
| Cow position: | chr3:56059884-56059706 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 126, 133 |
| Conread position: | 3-182 |
| Cow position: | chr3:70565665-70565839 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 171, 122 |
| Conread position: | 3-182 |
| Cow position: | chr3:70762050-70762224 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 167, 58 |
| Conread position: | 3-182 |
| Cow position: | chr3:76922590-76922764 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 169, 100 |
| Conread position: | 4-178 |
| Cow position: | chr3:54506779-54506608 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 142 |
| Conread position: | 4-178 |
| Cow position: | chr3:74533421-74533253 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 4-182 |
| Cow position: | chr3:15950841-15951013 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 168, 122 |
| Conread position: | 5-181 |
| Cow position: | chr3:73461037-73460863 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 167, 35 |
| Conread position: | 5-182 |
| Cow position: | chr3:55189682-55189858 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 6-170 |
| Cow position: | chr3:478730-478888 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-178 |
| Cow position: | chr3:59799316-59799152 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 9-182 |
| Cow position: | chr3:13353428-13353260 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 13-181 |
| Cow position: | chr3:12670552-12670716 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 159, 27 |
| Conread position: | 14-182 |
| Cow position: | chr3:73237258-73237092 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 154, 131 |
| Conread position: | 22-181 |
| Cow position: | chr3:60264662-60264818 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 146, 109 |
| Conread position: | 33-182 |
| Cow position: | chr3:19626463-19626611 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 139, 101 |
Show alignments to all cow chromosomes.