Cow genome map
| Conread name: | Lng1-LNG010036C05 |
| Conread position: | 3-136 |
| Cow position: | chr5:50600171-50600038 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 3-167 |
| Cow position: | chr5:57686614-57686776 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 140 |
| Conread position: | 3-171 |
| Cow position: | chr5:69099843-69099679 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-181 |
| Cow position: | chr5:23168703-23168880 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 169, 142 |
| Conread position: | 3-181 |
| Cow position: | chr5:42050675-42050500 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 162, 99 |
| Conread position: | 3-182 |
| Cow position: | chr5:12434666-12434481 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 126, 118 |
| Conread position: | 3-182 |
| Cow position: | chr5:17086898-17087074 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 172, 49 |
| Conread position: | 3-182 |
| Cow position: | chr5:21617581-21617405 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 162, 146 |
| Conread position: | 3-182 |
| Cow position: | chr5:44446742-44446920 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 124 |
| Conread position: | 3-182 |
| Cow position: | chr5:56070982-56070804 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 169, 143 |
| Conread position: | 3-182 |
| Cow position: | chr5:56338898-56339070 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-182 |
| Cow position: | chr5:59626849-59627026 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 166, 11 |
| Conread position: | 3-182 |
| Cow position: | chr5:62172535-62172362 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 170, 114 |
| Conread position: | 4-171 |
| Cow position: | chr5:61102838-61102675 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 83 |
| Conread position: | 4-178 |
| Cow position: | chr5:6045418-6045245 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 123 |
| Conread position: | 4-182 |
| Cow position: | chr5:65941128-65941302 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 4-185 |
| Cow position: | chr5:20288141-20288316 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 5-196 |
| Cow position: | chr5:35982616-35982806 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 9-129 |
| Cow position: | chr5:9233872-9233992 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-182 |
| Cow position: | chr5:30253853-30253689 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 158, 112 |
| Conread position: | 33-199 |
| Cow position: | chr5:63192648-63192809 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 147, 29 |
Show alignments to all cow chromosomes.