Cow genome map
| Conread name: | Lng1-LNG010036C05 |
| Conread position: | 2-171 |
| Cow position: | chrX:4289569-4289401 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 142 |
| Conread position: | 3-132 |
| Cow position: | chrX:2936081-2935952 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-167 |
| Cow position: | chrX:1466286-1466127 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 3-169 |
| Cow position: | chrX:41192828-41192664 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 3-178 |
| Cow position: | chrX:26881441-26881613 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-178 |
| Cow position: | chrX:27306578-27306407 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 3-181 |
| Cow position: | chrX:41871191-41871015 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 169, 133 |
| Conread position: | 3-182 |
| Cow position: | chrX:4152907-4153086 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 166, 132 |
| Conread position: | 3-182 |
| Cow position: | chrX:9252039-9252213 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 169, 108 |
| Conread position: | 3-182 |
| Cow position: | chrX:17726099-17725923 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 169, 132 |
| Conread position: | 3-182 |
| Cow position: | chrX:20584452-20584273 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 172, 118 |
| Conread position: | 3-182 |
| Cow position: | chrX:21986167-21986343 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 170, 82 |
| Conread position: | 3-182 |
| Cow position: | chrX:29050371-29050196 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 169, 63 |
| Conread position: | 3-182 |
| Cow position: | chrX:31312153-31311978 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-182 |
| Cow position: | chrX:34411970-34411791 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 169, 136 |
| Conread position: | 3-182 |
| Cow position: | chrX:34532644-34532470 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-182 |
| Cow position: | chrX:37780985-37781162 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 162, 130 |
| Conread position: | 3-182 |
| Cow position: | chrX:40269616-40269437 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 3-182 |
| Cow position: | chrX:42469817-42469993 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 137 |
| Conread position: | 3-182 |
| Cow position: | chrX:42927700-42927870 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 169, 120 |
| Conread position: | 3-182 |
| Cow position: | chrX:46429695-46429871 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 4-171 |
| Cow position: | chrX:11938810-11938971 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 123 |
| Conread position: | 4-182 |
| Cow position: | chrX:35224419-35224245 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 169, 117 |
| Conread position: | 5-164 |
| Cow position: | chrX:19273585-19273744 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-182 |
| Cow position: | chrX:18272936-18273109 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 167, 61 |
| Conread position: | 9-182 |
| Cow position: | chrX:14883838-14884009 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 5 |
Show alignments to all cow chromosomes.