Cow genome map

Conread name: Lng1-LNG010047D04

Conread position: 1-256
Cow position: chr11:8552277-8552016 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 111, 28

Conread position: 1-262
Cow position: chr11:27724422-27724685 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 102, 27

Conread position: 1-264
Cow position: chr11:37727563-37727302 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 30

Conread position: 2-245
Cow position: chr11:73326079-73326323 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 27

Conread position: 2-262
Cow position: chr11:49236499-49236759 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 102, 31

Conread position: 2-264
Cow position: chr11:41033383-41033117 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 30

Conread position: 2-310
Cow position: chr11:21539800-21540112 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 117, 29

Conread position: 2-326
Cow position: chr11:38794076-38793773 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 3-243
Cow position: chr11:29003974-29003741 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 100, 26

Conread position: 3-253
Cow position: chr11:62788136-62787885 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 28

Conread position: 38-250
Cow position: chr11:26121486-26121695 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 61

Conread position: 38-258
Cow position: chr11:47595819-47595586 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 61, 0

Conread position: 38-261
Cow position: chr11:67848516-67848744 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 38-262
Cow position: chr11:10698294-10698530 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 38-289
Cow position: chr11:4052917-4053167 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 72, 137

Conread position: 38-321
Cow position: chr11:7681409-7681098 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 66, 50

Conread position: 38-326
Cow position: chr11:80591795-80591492 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 61

Conread position: 38-328
Cow position: chr11:37304635-37304321 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 61, 295

Conread position: 39-264
Cow position: chr11:43526625-43526850 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 63

Conread position: 44-264
Cow position: chr11:4060527-4060739 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 48

Conread position: 48-325
Cow position: chr11:48167654-48167945 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 271

Conread position: 51-261
Cow position: chr11:38235338-38235552 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 52, 76

Conread position: 577-797
Cow position: chr11:46780922-46781142 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 64

Conread position: 577-797
Cow position: chr11:58399474-58399259 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 99, 63

Conread position: 578-795
Cow position: chr11:3681698-3681913 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 98, 110

Conread position: 578-797
Cow position: chr11:27833610-27833828 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 20

Conread position: 578-797
Cow position: chr11:30194624-30194412 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 59

Conread position: 578-797
Cow position: chr11:38638181-38638398 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 98, 125

Conread position: 578-797
Cow position: chr11:67347970-67348186 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 93, 139

Conread position: 579-796
Cow position: chr11:82345983-82346197 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 97, 149

Conread position: 580-792
Cow position: chr11:8844324-8844111 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 580-793
Cow position: chr11:51034421-51034207 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr11:4206317-4206101 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 100, 0

Conread position: 580-797
Cow position: chr11:6343604-6343387 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 96, 202

Conread position: 580-797
Cow position: chr11:16229507-16229720 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 144

Conread position: 580-797
Cow position: chr11:17854239-17854021 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr11:30088021-30087803 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr11:38505086-38505304 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr11:49935603-49935821 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 51

Conread position: 580-797
Cow position: chr11:56228074-56227856 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 96, 109

Conread position: 580-797
Cow position: chr11:61397476-61397694 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr11:67453798-67453582 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 60

Conread position: 580-797
Cow position: chr11:67746557-67746340 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 118

Conread position: 580-797
Cow position: chr11:67920197-67920411 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 96, 71

Conread position: 580-797
Cow position: chr11:73513228-73513445 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 96, 36

Conread position: 580-797
Cow position: chr11:83001174-83000956 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 586-797
Cow position: chr11:12178227-12178015 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 586-797
Cow position: chr11:41260789-41261001 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 587-797
Cow position: chr11:41167556-41167767 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 587-797
Cow position: chr11:59871948-59871742 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 89, 40

Conread position: 588-797
Cow position: chr11:54302674-54302464 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 588-797
Cow position: chr11:58136854-58136644 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 593-797
Cow position: chr11:7681094-7680890 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 189

Conread position: 595-797
Cow position: chr11:48428271-48428071 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 164

Conread position: 596-797
Cow position: chr11:41599559-41599761 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 19

Conread position: 598-797
Cow position: chr11:59623467-59623667 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 14

Conread position: 601-790
Cow position: chr11:47573412-47573602 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 601-793
Cow position: chr11:74389323-74389130 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:2285837-2285640 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:4734407-4734210 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:8366684-8366487 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:9708272-9708075 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:10698622-10698819 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:15047583-15047386 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:20285494-20285691 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:23904406-23904209 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:24333869-24334066 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:24493684-24493881 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:28125637-28125442 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 49

Conread position: 601-797
Cow position: chr11:28631657-28631460 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:30777087-30776890 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:30929506-30929309 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:32875819-32876016 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:50510548-50510745 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:50833635-50833832 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:59444422-59444619 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:59583554-59583357 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:61131829-61132026 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr11:65760483-65760679 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 601-797
Cow position: chr11:75711129-75711326 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 602-797
Cow position: chr11:22617823-22618019 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 603-797
Cow position: chr11:10871703-10871898 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 604-797
Cow position: chr11:15836032-15835839 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 72, 108

Conread position: 604-797
Cow position: chr11:84774286-84774092 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 32, 41

Conread position: 608-797
Cow position: chr11:43361603-43361792 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 68, 25

Conread position: 624-778
Cow position: chr11:81316780-81316934 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 12

Conread position: 624-797
Cow position: chr11:41164401-41164227 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 626-797
Cow position: chr11:7704794-7704623 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 101

Conread position: 644-793
Cow position: chr11:27938691-27938541 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.