Cow genome map


           Conread name:
           Lng1-LNG010047D04
        

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               111, 28
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               102, 27
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               2-245
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               101, 27
               

               Conread position:
               2-262
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               102, 31
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               2-310
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               117, 29
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               3-243
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               3-253
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               38-250
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               38-258
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               38-261
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               38-262
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               38-289
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               72, 137
               

               Conread position:
               38-321
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               38-326
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 61
               

               Conread position:
               38-328
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               61, 295
               

               Conread position:
               39-264
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               87, 63
               

               Conread position:
               44-264
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 48
               

               Conread position:
               48-325
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 271
               

               Conread position:
               51-261
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               577-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               99, 64
               

               Conread position:
               577-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               578-795
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               98, 110
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               98, 20
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               98, 125
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 139
               

               Conread position:
               579-796
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               97, 149
               

               Conread position:
               580-792
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-793
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               96, 202
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 144
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               96, 109
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               96, 60
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               96, 118
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               96, 71
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               587-797
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               587-797
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               89, 40
               

               Conread position:
               588-797
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               588-797
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               593-797
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               12, 189
               

               Conread position:
               595-797
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               81, 164
               

               Conread position:
               596-797
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               598-797
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 14
               

               Conread position:
               601-790
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-793
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 49
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               602-797
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               603-797
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               604-797
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               72, 108
               

               Conread position:
               604-797
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               32, 41
               

               Conread position:
               608-797
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               624-778
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               624-797
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               626-797
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               644-793
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.