Cow genome map


           Conread name:
           Lng1-LNG010047D04
        

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               111, 30
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               98, 16
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 30
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               119, 28
               

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               131, 30
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 30
               

               Conread position:
               2-256
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               112, 29
               

               Conread position:
               3-255
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               26-329
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 175
               

               Conread position:
               38-221
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               38-262
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               65, 192
               

               Conread position:
               38-263
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               38-264
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 201
               

               Conread position:
               38-265
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               67, 106
               

               Conread position:
               38-310
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 173
               

               Conread position:
               38-326
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 127
               

               Conread position:
               38-328
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 289
               

               Conread position:
               38-329
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               39-261
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 194
               

               Conread position:
               39-797
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               637, 617
               

               Conread position:
               40-228
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               577-775
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               99, 79
               

               Conread position:
               577-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 64
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               8, 125
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 62
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               579-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               97, 143
               

               Conread position:
               580-796
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               96, 109
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               90, 132
               

               Conread position:
               588-797
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               88, 161
               

               Conread position:
               592-797
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               598-750
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               599-797
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               600-791
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               75, 132
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 107
               

               Conread position:
               604-797
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               605-797
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               613-797
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               636-797
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.