Cow genome map
| Conread name: | Lng1-LNG010047D04 |
| Conread position: | 1-258 |
| Cow position: | chr14:38055742-38055990 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 111, 30 |
| Conread position: | 1-262 |
| Cow position: | chr14:20827447-20827712 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 1-264 |
| Cow position: | chr14:12546101-12545840 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 1-264 |
| Cow position: | chr14:20467556-20467292 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 1-264 |
| Cow position: | chr14:47600394-47600135 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 1-266 |
| Cow position: | chr14:45300339-45300079 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 1-321 |
| Cow position: | chr14:45583715-45583395 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 30 |
| Conread position: | 1-326 |
| Cow position: | chr14:403588-403244 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 2-256 |
| Cow position: | chr14:39301887-39301632 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 112, 29 |
| Conread position: | 3-255 |
| Cow position: | chr14:4030167-4029916 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 3-277 |
| Cow position: | chr14:7647540-7647270 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 26-329 |
| Cow position: | chr14:1892218-1891901 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 175 |
| Conread position: | 38-221 |
| Cow position: | chr14:32500682-32500490 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 38-262 |
| Cow position: | chr14:13464733-13464499 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 65, 192 |
| Conread position: | 38-263 |
| Cow position: | chr14:41962165-41962401 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 135 |
| Conread position: | 38-264 |
| Cow position: | chr14:21201309-21201076 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 61, 201 |
| Conread position: | 38-265 |
| Cow position: | chr14:25993177-25992948 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 67, 106 |
| Conread position: | 38-310 |
| Cow position: | chr14:8884494-8884791 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 173 |
| Conread position: | 38-326 |
| Cow position: | chr14:17762000-17762308 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 127 |
| Conread position: | 38-328 |
| Cow position: | chr14:13385893-13386206 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 63, 289 |
| Conread position: | 38-329 |
| Cow position: | chr14:12834238-12833927 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 136 |
| Conread position: | 39-261 |
| Cow position: | chr14:35300643-35300874 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 194 |
| Conread position: | 39-797 |
| Cow position: | chr14:13684196-13683438 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 637, 617 |
| Conread position: | 40-228 |
| Cow position: | chr14:48608080-48607897 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 577-775 |
| Cow position: | chr14:44584332-44584134 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 79 |
| Conread position: | 577-797 |
| Cow position: | chr14:34354642-34354422 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 578-797 |
| Cow position: | chr14:13810946-13811163 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 578-797 |
| Cow position: | chr14:28117149-28116933 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 578-797 |
| Cow position: | chr14:46303926-46303721 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 62 |
| Conread position: | 578-797 |
| Cow position: | chr14:46549221-46549003 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 579-797 |
| Cow position: | chr14:45848247-45848030 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 97, 143 |
| Conread position: | 580-796 |
| Cow position: | chr14:12483489-12483274 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 101, 60 |
| Conread position: | 580-797 |
| Cow position: | chr14:30581375-30581592 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 96, 109 |
| Conread position: | 580-797 |
| Cow position: | chr14:31400398-31400614 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 580-797 |
| Cow position: | chr14:34629105-34629323 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr14:40969245-40969027 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 586-797 |
| Cow position: | chr14:38459071-38459282 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 132 |
| Conread position: | 588-797 |
| Cow position: | chr14:44076604-44076813 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 88, 161 |
| Conread position: | 592-797 |
| Cow position: | chr14:9876206-9876410 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 598-750 |
| Cow position: | chr14:25363364-25363516 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 599-797 |
| Cow position: | chr14:45583381-45583186 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 600-791 |
| Cow position: | chr14:38406054-38405859 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:8396711-8396908 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:8925165-8924968 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:13105010-13104813 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:13581938-13581741 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:19419163-19418966 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:19524121-19523924 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:26129111-26129310 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:31289927-31289731 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 132 |
| Conread position: | 601-797 |
| Cow position: | chr14:31737048-31736851 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:31881820-31882016 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 601-797 |
| Cow position: | chr14:34763798-34763601 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:37444037-37443840 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:38238027-38238224 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:38651980-38651783 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:40483393-40483590 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr14:48251385-48251576 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 604-797 |
| Cow position: | chr14:46007368-46007176 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 605-797 |
| Cow position: | chr14:8884817-8885010 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 613-797 |
| Cow position: | chr14:35016416-35016231 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 636-797 |
| Cow position: | chr14:32500206-32500044 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.