Cow genome map


           Conread name:
           Lng1-LNG010047D04
        

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               103, 30
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               151, 32
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 30
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               102, 30
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               103, 28
               

               Conread position:
               2-210
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               3-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               124, 30
               

               Conread position:
               38-255
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               68, 174
               

               Conread position:
               38-262
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               38-293
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 225
               

               Conread position:
               38-326
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               72, 66
               

               Conread position:
               38-326
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               65, 301
               

               Conread position:
               39-326
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               65, 265
               

               Conread position:
               40-264
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               577-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               99, 115
               

               Conread position:
               578-793
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               578-796
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               93, 104
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               98, 144
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 150
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               160, 63
               

               Conread position:
               580-793
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-793
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 122
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               91, 108
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 151
               

               Conread position:
               586-793
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 64
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               589-793
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               87, 118
               

               Conread position:
               589-794
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               591-797
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               595-795
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               595-797
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               598-795
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               78, 115
               

               Conread position:
               601-792
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-792
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               605-797
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               605-797
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               605-797
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               624-797
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               625-797
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               634-797
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               655-797
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.