Cow genome map

Conread name: Lng1-LNG010047D04

Conread position: 1-246
Cow position: chr15:13681165-13680922 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 30

Conread position: 1-264
Cow position: chr15:42218864-42218609 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 109, 30

Conread position: 1-264
Cow position: chr15:43248224-43247968 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 151, 32

Conread position: 1-274
Cow position: chr15:36329028-36329307 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 30

Conread position: 1-306
Cow position: chr15:1082852-1082540 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 102, 30

Conread position: 1-338
Cow position: chr15:23561461-23561102 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 103, 28

Conread position: 2-210
Cow position: chr15:52693745-52693548 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 30

Conread position: 3-261
Cow position: chr15:2928675-2928424 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 28

Conread position: 3-326
Cow position: chr15:30725828-30726155 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 30

Conread position: 38-255
Cow position: chr15:17288389-17288164 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 174

Conread position: 38-262
Cow position: chr15:2590796-2590561 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 38-293
Cow position: chr15:7319958-7319704 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 225

Conread position: 38-326
Cow position: chr15:481967-481663 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 72, 66

Conread position: 38-326
Cow position: chr15:3007437-3007755 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 65, 301

Conread position: 39-326
Cow position: chr15:8937800-8937494 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 65, 265

Conread position: 40-264
Cow position: chr15:6331498-6331272 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 70, 59

Conread position: 577-797
Cow position: chr15:4829431-4829212 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 115

Conread position: 578-793
Cow position: chr15:13545974-13546172 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 578-796
Cow position: chr15:23774392-23774180 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 93, 104

Conread position: 578-797
Cow position: chr15:794148-793932 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 67, 17

Conread position: 578-797
Cow position: chr15:8629402-8629184 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 578-797
Cow position: chr15:13388252-13388471 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 98, 144

Conread position: 578-797
Cow position: chr15:20348172-20348390 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 150

Conread position: 578-797
Cow position: chr15:33700600-33700381 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 160, 63

Conread position: 580-793
Cow position: chr15:9522105-9522319 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 580-793
Cow position: chr15:32065195-32065409 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr15:4082095-4081877 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr15:6563986-6563769 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 122

Conread position: 580-797
Cow position: chr15:20352711-20352926 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 108

Conread position: 580-797
Cow position: chr15:21806943-21806725 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr15:33228960-33229176 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 50

Conread position: 580-797
Cow position: chr15:47201481-47201693 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 151

Conread position: 586-793
Cow position: chr15:2664474-2664268 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 64

Conread position: 586-797
Cow position: chr15:7985339-7985551 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 586-797
Cow position: chr15:21152733-21152945 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 589-793
Cow position: chr15:29273162-29273362 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 118

Conread position: 589-794
Cow position: chr15:1776246-1776039 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 0

Conread position: 591-797
Cow position: chr15:21831021-21830814 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 595-795
Cow position: chr15:7981066-7981269 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 595-797
Cow position: chr15:36355990-36356193 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 598-795
Cow position: chr15:52867707-52867513 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 115

Conread position: 601-792
Cow position: chr15:20647237-20647045 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-792
Cow position: chr15:45211085-45210893 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:678134-677937 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:1082510-1082307 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 14

Conread position: 601-797
Cow position: chr15:1128918-1129121 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 14

Conread position: 601-797
Cow position: chr15:1774518-1774322 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 601-797
Cow position: chr15:2533804-2533607 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:6616871-6616674 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 601-797
Cow position: chr15:6758404-6758601 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:16784393-16784202 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 601-797
Cow position: chr15:16801347-16801150 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:21644754-21644945 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 601-797
Cow position: chr15:21939950-21940147 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:23666421-23666618 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:41029246-41029443 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:42597179-42597376 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr15:45944622-45944820 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 601-797
Cow position: chr15:50142332-50142135 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 605-797
Cow position: chr15:2590470-2590279 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 605-797
Cow position: chr15:2592831-2592640 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 605-797
Cow position: chr15:38937835-38937644 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 624-797
Cow position: chr15:31585348-31585522 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 625-797
Cow position: chr15:29899380-29899211 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 50, 78

Conread position: 634-797
Cow position: chr15:24090868-24090704 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 655-797
Cow position: chr15:38983680-38983537 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.