Cow genome map
| Conread name: | Lng1-LNG010047D04 |
| Conread position: | 1-256 |
| Cow position: | chr16:45551421-45551168 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 1-329 |
| Cow position: | chr16:24147726-24147385 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 2-248 |
| Cow position: | chr16:46029456-46029208 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 2-264 |
| Cow position: | chr16:37924609-37924858 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 2-320 |
| Cow position: | chr16:14441440-14441124 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 28 |
| Conread position: | 9-258 |
| Cow position: | chr16:832035-832291 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 38-250 |
| Cow position: | chr16:41169207-41168986 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 38-261 |
| Cow position: | chr16:47404430-47404198 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 38-262 |
| Cow position: | chr16:4757064-4756827 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 38-310 |
| Cow position: | chr16:54703524-54703247 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 120 |
| Conread position: | 43-256 |
| Cow position: | chr16:34839997-34839779 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 50-326 |
| Cow position: | chr16:12160249-12160547 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 577-790 |
| Cow position: | chr16:2305111-2304896 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 578-794 |
| Cow position: | chr16:28267968-28268184 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 171 |
| Conread position: | 580-794 |
| Cow position: | chr16:14029415-14029618 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 580-797 |
| Cow position: | chr16:1734485-1734266 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr16:7303502-7303284 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr16:15312027-15311809 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr16:24407658-24407438 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 580-797 |
| Cow position: | chr16:24636768-24636986 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr16:37053784-37053566 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr16:47773010-47772792 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 581-797 |
| Cow position: | chr16:24445189-24444969 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 16, 205 |
| Conread position: | 587-797 |
| Cow position: | chr16:10440978-10440767 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 588-797 |
| Cow position: | chr16:6677459-6677249 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 589-794 |
| Cow position: | chr16:13601905-13602107 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 87, 95 |
| Conread position: | 593-796 |
| Cow position: | chr16:42751879-42751680 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 596-797 |
| Cow position: | chr16:20634491-20634686 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 597-774 |
| Cow position: | chr16:7504164-7503990 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 600-797 |
| Cow position: | chr16:5416550-5416748 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 600-797 |
| Cow position: | chr16:17142128-17141931 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 601-797 |
| Cow position: | chr16:2960404-2960207 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:4972802-4972997 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:12485575-12485772 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:16680870-16681067 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:19081771-19081580 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 601-797 |
| Cow position: | chr16:20278565-20278368 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:23711562-23711759 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:24987779-24987976 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:25075318-25075121 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:25880041-25879844 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:27593097-27593294 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:34482882-34482693 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 601-797 |
| Cow position: | chr16:40879317-40879120 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:42211221-42211024 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:45465192-45465389 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:48371378-48371575 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:49780225-49780422 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr16:54287266-54287065 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 604-797 |
| Cow position: | chr16:1958005-1958199 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 604-797 |
| Cow position: | chr16:12651650-12651456 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 609-797 |
| Cow position: | chr16:51041252-51041075 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 633-797 |
| Cow position: | chr16:37486562-37486729 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 634-795 |
| Cow position: | chr16:43852-43692 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 654-797 |
| Cow position: | chr16:46365130-46365274 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.