Cow genome map
| Conread name: | Lng1-LNG010047D04 |
| Conread position: | 1-262 |
| Cow position: | chr17:5380584-5380324 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 1-264 |
| Cow position: | chr17:10445799-10445533 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 98, 30 |
| Conread position: | 1-265 |
| Cow position: | chr17:20091000-20091252 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 223, 30 |
| Conread position: | 2-266 |
| Cow position: | chr17:13989646-13989892 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 3-264 |
| Cow position: | chr17:13916222-13916465 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-264 |
| Cow position: | chr17:13935524-13935771 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-264 |
| Cow position: | chr17:20233829-20233570 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 116, 28 |
| Conread position: | 36-290 |
| Cow position: | chr17:4298743-4298493 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 107 |
| Conread position: | 38-275 |
| Cow position: | chr17:453441-453205 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 38-310 |
| Cow position: | chr17:6072143-6071852 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 127 |
| Conread position: | 38-326 |
| Cow position: | chr17:12743562-12743276 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 212, 66 |
| Conread position: | 38-338 |
| Cow position: | chr17:3197020-3197347 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 61, 197 |
| Conread position: | 39-264 |
| Cow position: | chr17:41892768-41893005 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 60, 91 |
| Conread position: | 577-797 |
| Cow position: | chr17:8205260-8205034 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 579-765 |
| Cow position: | chr17:18814463-18814272 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 580-797 |
| Cow position: | chr17:254399-254186 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 50 |
| Conread position: | 587-796 |
| Cow position: | chr17:9753084-9752879 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 588-797 |
| Cow position: | chr17:5806191-5806401 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 589-797 |
| Cow position: | chr17:18777531-18777742 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 592-797 |
| Cow position: | chr17:18324120-18324316 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 595-795 |
| Cow position: | chr17:29156664-29156463 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 595-797 |
| Cow position: | chr17:11913458-11913661 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 596-797 |
| Cow position: | chr17:38829170-38828971 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 58 |
| Conread position: | 601-797 |
| Cow position: | chr17:1970436-1970239 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:2521155-2521352 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:6612307-6612110 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:15708708-15708905 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:20225887-20225690 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:20391059-20390862 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:20546422-20546225 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:21716747-21716550 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:22248967-22249164 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:26829459-26829656 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:30182296-30182492 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:36284552-36284355 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:37528687-37528884 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr17:39823909-39824106 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 604-795 |
| Cow position: | chr17:29083450-29083267 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 604-796 |
| Cow position: | chr17:4211211-4211019 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 72, 145 |
| Conread position: | 606-797 |
| Cow position: | chr17:19369724-19369531 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 164 |
Show alignments to all cow chromosomes.