Cow genome map
| Conread name: | Lng1-LNG010047D04 |
| Conread position: | 1-256 |
| Cow position: | chr20:21015169-21015416 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 135, 32 |
| Conread position: | 2-253 |
| Cow position: | chr20:28822399-28822643 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 146, 29 |
| Conread position: | 38-240 |
| Cow position: | chr20:9036970-9037172 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 134 |
| Conread position: | 38-253 |
| Cow position: | chr20:23847397-23847613 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 38-254 |
| Cow position: | chr20:8349293-8349505 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 204, 67 |
| Conread position: | 38-262 |
| Cow position: | chr20:8970102-8970336 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 38-301 |
| Cow position: | chr20:35133513-35133252 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 150 |
| Conread position: | 38-318 |
| Cow position: | chr20:13789878-13789592 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 234 |
| Conread position: | 38-327 |
| Cow position: | chr20:10576476-10576770 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 127 |
| Conread position: | 38-338 |
| Cow position: | chr20:35145574-35145274 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 53, 241 |
| Conread position: | 39-262 |
| Cow position: | chr20:16107295-16107070 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 39-264 |
| Cow position: | chr20:4735452-4735688 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 143 |
| Conread position: | 39-264 |
| Cow position: | chr20:37272073-37271839 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 95, 173 |
| Conread position: | 39-303 |
| Cow position: | chr20:29633428-29633715 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 44-266 |
| Cow position: | chr20:5576058-5575833 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 148 |
| Conread position: | 577-793 |
| Cow position: | chr20:12047980-12047777 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 578-783 |
| Cow position: | chr20:42254545-42254743 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 93, 136 |
| Conread position: | 578-795 |
| Cow position: | chr20:15240540-15240753 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 578-797 |
| Cow position: | chr20:10035250-10035459 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 98, 55 |
| Conread position: | 578-797 |
| Cow position: | chr20:26076056-26075837 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 580-791 |
| Cow position: | chr20:24904046-24904258 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr20:826278-826060 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr20:6135493-6135711 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr20:18092404-18092620 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 580-797 |
| Cow position: | chr20:30479607-30479388 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr20:35159093-35159305 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 150 |
| Conread position: | 586-797 |
| Cow position: | chr20:9707646-9707851 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 589-795 |
| Cow position: | chr20:17668234-17668024 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 65, 165 |
| Conread position: | 595-797 |
| Cow position: | chr20:28956468-28956671 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 598-796 |
| Cow position: | chr20:12489666-12489864 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 601-796 |
| Cow position: | chr20:26052876-26053072 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:5085860-5086057 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:5503270-5503467 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:7081339-7081536 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:7597381-7597577 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 601-797 |
| Cow position: | chr20:9223329-9223132 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:11331197-11331394 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:13303821-13304018 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:14925165-14925362 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:16559055-16559252 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:22048843-22048646 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr20:30146908-30146715 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 102 |
| Conread position: | 601-797 |
| Cow position: | chr20:34231393-34231590 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 602-793 |
| Cow position: | chr20:3808297-3808489 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 604-793 |
| Cow position: | chr20:13653866-13654050 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 604-797 |
| Cow position: | chr20:14877532-14877340 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 72, 47 |
| Conread position: | 604-797 |
| Cow position: | chr20:30579337-30579143 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 607-756 |
| Cow position: | chr20:13660874-13661024 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 69, 91 |
| Conread position: | 623-797 |
| Cow position: | chr20:20092755-20092579 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 642-775 |
| Cow position: | chr20:17762413-17762280 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 646-797 |
| Cow position: | chr20:33181063-33181218 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.