Cow genome map
Conread name: | Lng1-LNG010047D04 |
Conread position: | 1-215 |
Cow position: | chr21:20925887-20926090 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 152 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-256 |
Cow position: | chr21:16167225-16167485 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 196 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 102, 19 |
Conread position: | 1-264 |
Cow position: | chr21:12153753-12153491 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 200 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 30, 38 |
Conread position: | 1-264 |
Cow position: | chr21:14727674-14727420 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 194 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-264 |
Cow position: | chr21:28057210-28056962 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 181 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-277 |
Cow position: | chr21:18979237-18979501 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 187 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 118, 28 |
Conread position: | 1-331 |
Cow position: | chr21:18846205-18846558 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 242 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 119, 29 |
Conread position: | 2-264 |
Cow position: | chr21:24698094-24697834 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 202 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 101, 27 |
Conread position: | 3-264 |
Cow position: | chr21:20243677-20243923 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 189 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 107, 28 |
Conread position: | 3-310 |
Cow position: | chr21:33620377-33620066 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 30 |
Conread position: | 36-262 |
Cow position: | chr21:26633310-26633551 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 184 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 38-254 |
Cow position: | chr21:32814229-32814453 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 164 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 66, 127 |
Conread position: | 38-262 |
Cow position: | chr21:451792-451555 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 182 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 38-262 |
Cow position: | chr21:26628685-26628446 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 182 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 38-263 |
Cow position: | chr21:33257472-33257234 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 178 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 38-263 |
Cow position: | chr21:44761768-44762006 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 38-264 |
Cow position: | chr21:9011585-9011815 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 168 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 65, 201 |
Conread position: | 38-266 |
Cow position: | chr21:1463821-1463587 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 173 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 61, 110 |
Conread position: | 38-280 |
Cow position: | chr21:2293275-2293518 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 200 |
Conread position: | 38-308 |
Cow position: | chr21:24606984-24606722 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 202 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 56, 153 |
Conread position: | 38-309 |
Cow position: | chr21:34141835-34142110 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 205 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 76, 119 |
Conread position: | 39-209 |
Cow position: | chr21:24130673-24130499 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 139 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 52, 123 |
Conread position: | 44-329 |
Cow position: | chr21:3253540-3253229 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 232 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 60, 108 |
Conread position: | 45-329 |
Cow position: | chr21:33307871-33307586 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 201 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 73, 124 |
Conread position: | 48-264 |
Cow position: | chr21:28730502-28730293 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 150 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 48-264 |
Cow position: | chr21:31576090-31575865 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 180 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 55, 121 |
Conread position: | 50-265 |
Cow position: | chr21:34684929-34684706 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 173 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 65, 49 |
Conread position: | 577-796 |
Cow position: | chr21:48262426-48262207 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 163 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 99, 9 |
Conread position: | 577-797 |
Cow position: | chr21:3253245-3253013 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 179 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 578-750 |
Cow position: | chr21:10886846-10886676 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 120 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 578-780 |
Cow position: | chr21:5596400-5596197 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 578-795 |
Cow position: | chr21:9863336-9863544 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 157 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 23, 9 |
Conread position: | 578-797 |
Cow position: | chr21:21919097-21918882 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 148 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 578-797 |
Cow position: | chr21:42460452-42460667 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 172 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 8, 18 |
Conread position: | 578-797 |
Cow position: | chr21:44219289-44219069 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 165 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 579-792 |
Cow position: | chr21:18829277-18829483 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 579-795 |
Cow position: | chr21:28988892-28988684 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 152 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 580-797 |
Cow position: | chr21:11144242-11144460 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 152 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 580-797 |
Cow position: | chr21:18786905-18787119 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 96, 50 |
Conread position: | 580-797 |
Cow position: | chr21:28598198-28597982 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 91, 137 |
Conread position: | 580-797 |
Cow position: | chr21:28915368-28915585 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 580-797 |
Cow position: | chr21:39400843-39400626 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 96, 84 |
Conread position: | 583-797 |
Cow position: | chr21:18285411-18285196 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 164 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 584-765 |
Cow position: | chr21:24887248-24887067 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 139 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 92, 143 |
Conread position: | 586-797 |
Cow position: | chr21:37298742-37298530 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 163 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 588-797 |
Cow position: | chr21:32237939-32237729 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 149 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 588-797 |
Cow position: | chr21:32773535-32773325 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 148 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 595-797 |
Cow position: | chr21:2905200-2905402 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 146 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 75, 95 |
Conread position: | 595-797 |
Cow position: | chr21:32573574-32573370 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 162 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 70, 156 |
Conread position: | 600-797 |
Cow position: | chr21:48234732-48234925 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 152 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 76, 51 |
Conread position: | 601-797 |
Cow position: | chr21:4719233-4719430 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 143 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:11405293-11405490 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 145 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:14534200-14534003 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:23329756-23329953 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 145 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:23341238-23341041 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 145 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:25598260-25598063 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:30298066-30297869 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 143 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:34823763-34823566 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 141 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:36892645-36892842 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 143 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:38866025-38866222 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 145 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 601-797 |
Cow position: | chr21:41796138-41796331 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 75, 96 |
Conread position: | 601-797 |
Cow position: | chr21:48273610-48273807 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 603-797 |
Cow position: | chr21:31950001-31949806 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 137 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 605-797 |
Cow position: | chr21:22463775-22463581 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 105, 74 |
Show alignments to all cow chromosomes.