Cow genome map
| Conread name: | Lng1-LNG010047D04 |
| Conread position: | 1-166 |
| Cow position: | chr22:2528302-2528458 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-264 |
| Cow position: | chr22:14535765-14536029 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 1-264 |
| Cow position: | chr22:45290731-45290470 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 1-274 |
| Cow position: | chr22:32892251-32891977 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 109, 31 |
| Conread position: | 1-324 |
| Cow position: | chr22:5338047-5338393 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 109, 28 |
| Conread position: | 1-338 |
| Cow position: | chr22:25743417-25743758 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 2-264 |
| Cow position: | chr22:32358489-32358752 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 29 |
| Conread position: | 2-264 |
| Cow position: | chr22:41469862-41470124 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 2-310 |
| Cow position: | chr22:12387903-12387589 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 2-338 |
| Cow position: | chr22:41271436-41271793 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 3-217 |
| Cow position: | chr22:31632731-31632943 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 28 |
| Conread position: | 3-314 |
| Cow position: | chr22:25456801-25456495 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 38-229 |
| Cow position: | chr22:15951925-15952120 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 38-262 |
| Cow position: | chr22:44099323-44099562 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 38-262 |
| Cow position: | chr22:44496619-44496387 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 38-263 |
| Cow position: | chr22:21593153-21592928 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 38-276 |
| Cow position: | chr22:6924765-6924524 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 38-277 |
| Cow position: | chr22:19597223-19597470 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 115 |
| Conread position: | 38-305 |
| Cow position: | chr22:15869411-15869127 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 39-298 |
| Cow position: | chr22:1874243-1873980 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 80, 60 |
| Conread position: | 39-334 |
| Cow position: | chr22:13187004-13186699 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 227, 66 |
| Conread position: | 40-261 |
| Cow position: | chr22:8840117-8839888 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 109 |
| Conread position: | 49-338 |
| Cow position: | chr22:32221168-32220864 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 81, 264 |
| Conread position: | 577-794 |
| Cow position: | chr22:43261302-43261085 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 578-797 |
| Cow position: | chr22:15356441-15356228 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 16, 167 |
| Conread position: | 578-797 |
| Cow position: | chr22:19048339-19048554 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 578-797 |
| Cow position: | chr22:43045277-43045497 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 579-795 |
| Cow position: | chr22:14510081-14510298 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 579-797 |
| Cow position: | chr22:15497431-15497212 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 580-797 |
| Cow position: | chr22:3488901-3489119 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr22:10161166-10160945 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 580-797 |
| Cow position: | chr22:11988270-11988489 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 580-797 |
| Cow position: | chr22:22107477-22107260 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 581-795 |
| Cow position: | chr22:1080321-1080111 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 137 |
| Conread position: | 586-797 |
| Cow position: | chr22:10550295-10550083 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 586-797 |
| Cow position: | chr22:10577059-10577271 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 586-797 |
| Cow position: | chr22:22607587-22607375 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 587-797 |
| Cow position: | chr22:32894337-32894125 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 588-797 |
| Cow position: | chr22:32943875-32943665 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 596-797 |
| Cow position: | chr22:27223422-27223620 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 596-797 |
| Cow position: | chr22:33387357-33387550 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 598-797 |
| Cow position: | chr22:36357473-36357274 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 601-793 |
| Cow position: | chr22:28714313-28714120 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-796 |
| Cow position: | chr22:12625145-12625341 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 6, 41 |
| Conread position: | 601-797 |
| Cow position: | chr22:699359-699162 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr22:8776304-8776501 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr22:9285328-9285525 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr22:13552770-13552573 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr22:15013279-15013472 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 601-797 |
| Cow position: | chr22:39902795-39902598 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr22:40828653-40828851 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 601-797 |
| Cow position: | chr22:44382139-44381942 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr22:45281361-45281166 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 603-797 |
| Cow position: | chr22:5312335-5312530 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 604-790 |
| Cow position: | chr22:30963310-30963125 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 604-797 |
| Cow position: | chr22:32019151-32019342 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 115 |
| Conread position: | 604-797 |
| Cow position: | chr22:36503294-36503484 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 612-796 |
| Cow position: | chr22:35910085-35910270 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 646-797 |
| Cow position: | chr22:3714134-3714286 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 657-797 |
| Cow position: | chr22:46022278-46022138 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 116 |
Show alignments to all cow chromosomes.