Cow genome map
| Conread name: | Lng1-LNG010047D04 |
| Conread position: | 1-305 |
| Cow position: | chr27:12112308-12111999 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 1-326 |
| Cow position: | chr27:1189411-1189081 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 2-247 |
| Cow position: | chr27:27064042-27063801 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 2-264 |
| Cow position: | chr27:18954803-18954540 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 105, 29 |
| Conread position: | 3-325 |
| Cow position: | chr27:25676671-25676999 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 27-326 |
| Cow position: | chr27:24570716-24571020 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 237, 85 |
| Conread position: | 36-187 |
| Cow position: | chr27:1032762-1032918 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 37-277 |
| Cow position: | chr27:8569298-8569058 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 85 |
| Conread position: | 38-263 |
| Cow position: | chr27:26330666-26330431 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 61, 116 |
| Conread position: | 38-265 |
| Cow position: | chr27:30306538-30306769 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 38-293 |
| Cow position: | chr27:11090755-11090506 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 165, 54 |
| Conread position: | 43-187 |
| Cow position: | chr27:27019666-27019514 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 51-336 |
| Cow position: | chr27:9090355-9090072 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 577-795 |
| Cow position: | chr27:21283818-21284022 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 138 |
| Conread position: | 578-797 |
| Cow position: | chr27:1521105-1520891 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 578-797 |
| Cow position: | chr27:4824255-4824034 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 578-797 |
| Cow position: | chr27:17565210-17565423 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 578-797 |
| Cow position: | chr27:18954474-18954254 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 580-797 |
| Cow position: | chr27:14297636-14297418 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 589-797 |
| Cow position: | chr27:8429431-8429214 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 589-797 |
| Cow position: | chr27:15375223-15375025 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 590-756 |
| Cow position: | chr27:9090058-9089897 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 595-797 |
| Cow position: | chr27:1588495-1588294 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 595-797 |
| Cow position: | chr27:12277519-12277321 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 599-797 |
| Cow position: | chr27:25971190-25971390 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 78, 91 |
| Conread position: | 601-797 |
| Cow position: | chr27:8959608-8959805 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr27:9970579-9970382 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr27:12006556-12006359 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr27:13309052-13308855 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 601-797 |
| Cow position: | chr27:22647224-22647421 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.