Cow genome map
| Conread name: | Lng1-LNG010047D04 | 
| Conread position: | 1-204 | 
| Cow position: | chr3:64015471-64015674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 102, 30 | 
| Conread position: | 1-240 | 
| Cow position: | chr3:64281416-64281649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 109, 27 | 
| Conread position: | 1-246 | 
| Cow position: | chr3:15548477-15548244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 225, 32 | 
| Conread position: | 1-256 | 
| Cow position: | chr3:47691659-47691407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 111, 27 | 
| Conread position: | 1-261 | 
| Cow position: | chr3:47630038-47630292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 110, 30 | 
| Conread position: | 1-262 | 
| Cow position: | chr3:64679098-64678844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 87, 30 | 
| Conread position: | 1-263 | 
| Cow position: | chr3:18815193-18814935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 30 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:24454854-24455109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 109, 30 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:64318425-64318166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 102, 30 | 
| Conread position: | 1-280 | 
| Cow position: | chr3:78520745-78520463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 98, 30 | 
| Conread position: | 1-320 | 
| Cow position: | chr3:38863376-38863075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 13, 31 | 
| Conread position: | 1-335 | 
| Cow position: | chr3:14633549-14633868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 77, 23 | 
| Conread position: | 1-335 | 
| Cow position: | chr3:65581509-65581829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 106, 30 | 
| Conread position: | 2-258 | 
| Cow position: | chr3:70469539-70469796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 97, 27 | 
| Conread position: | 2-261 | 
| Cow position: | chr3:55374763-55374511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 138, 29 | 
| Conread position: | 2-264 | 
| Cow position: | chr3:14466173-14466438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 101, 29 | 
| Conread position: | 2-264 | 
| Cow position: | chr3:18184605-18184340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 97, 27 | 
| Conread position: | 3-228 | 
| Cow position: | chr3:74407883-74407667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 107, 28 | 
| Conread position: | 5-329 | 
| Cow position: | chr3:30930204-30929869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 85, 27 | 
| Conread position: | 38-261 | 
| Cow position: | chr3:57481088-57481314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 109 | 
| Conread position: | 38-262 | 
| Cow position: | chr3:19027789-19028021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 65, 133 | 
| Conread position: | 38-262 | 
| Cow position: | chr3:43084887-43084653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 38-263 | 
| Cow position: | chr3:56148958-56148725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 61, 209 | 
| Conread position: | 38-264 | 
| Cow position: | chr3:30939166-30938930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 38-310 | 
| Cow position: | chr3:6853956-6854239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 81, 39 | 
| Conread position: | 38-310 | 
| Cow position: | chr3:74847257-74847539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 39-212 | 
| Cow position: | chr3:25584284-25584456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 39-249 | 
| Cow position: | chr3:39970399-39970616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 71, 60 | 
| Conread position: | 39-257 | 
| Cow position: | chr3:56718468-56718688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 52, 181 | 
| Conread position: | 39-326 | 
| Cow position: | chr3:8923261-8922955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 75, 295 | 
| Conread position: | 43-264 | 
| Cow position: | chr3:31933681-31933909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 61, 196 | 
| Conread position: | 48-227 | 
| Cow position: | chr3:39949430-39949615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 55, 149 | 
| Conread position: | 570-797 | 
| Cow position: | chr3:37451472-37451242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 571-797 | 
| Cow position: | chr3:6442438-6442210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 574-795 | 
| Cow position: | chr3:39214741-39214516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 36, 126 | 
| Conread position: | 577-781 | 
| Cow position: | chr3:55374438-55374239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 137 | 
| Conread position: | 577-792 | 
| Cow position: | chr3:14633879-14634084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 577-793 | 
| Cow position: | chr3:34557015-34557224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 577-797 | 
| Cow position: | chr3:15988302-15988081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 577-797 | 
| Cow position: | chr3:48273141-48272923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 99, 137 | 
| Conread position: | 577-797 | 
| Cow position: | chr3:49429407-49429612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 578-795 | 
| Cow position: | chr3:63219291-63219078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 98, 35 | 
| Conread position: | 578-796 | 
| Cow position: | chr3:63148279-63148499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 578-797 | 
| Cow position: | chr3:19717907-19718125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 152 | 
| Conread position: | 578-797 | 
| Cow position: | chr3:23497396-23497616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 578-797 | 
| Cow position: | chr3:52651593-52651799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 98, 133 | 
| Conread position: | 578-797 | 
| Cow position: | chr3:54087014-54087224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 80, 139 | 
| Conread position: | 578-797 | 
| Cow position: | chr3:55461303-55461515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 105, 36 | 
| Conread position: | 578-797 | 
| Cow position: | chr3:60184809-60185031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 578-797 | 
| Cow position: | chr3:84199130-84198924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 104, 45 | 
| Conread position: | 579-797 | 
| Cow position: | chr3:64171600-64171388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 580-787 | 
| Cow position: | chr3:4031102-4030895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 96, 169 | 
| Conread position: | 580-793 | 
| Cow position: | chr3:49564376-49564162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-796 | 
| Cow position: | chr3:37628245-37628034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 96, 123 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:2866295-2866513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:8605554-8605764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 96, 71 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:19881409-19881191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:30351635-30351417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:34392927-34393145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:37983006-37983224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:40520580-40520798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:47272519-47272737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:53879907-53880125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:56297744-56297526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:58766503-58766285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:64024671-64024890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 37, 139 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:72174946-72175164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr3:78520407-78520189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 581-797 | 
| Cow position: | chr3:40101500-40101710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 585-795 | 
| Cow position: | chr3:26920071-26919866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 91, 12 | 
| Conread position: | 586-797 | 
| Cow position: | chr3:14028339-14028127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 586-797 | 
| Cow position: | chr3:40049242-40049031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 90, 132 | 
| Conread position: | 586-797 | 
| Cow position: | chr3:49605088-49605300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 586-797 | 
| Cow position: | chr3:66968526-66968737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 90, 127 | 
| Conread position: | 588-797 | 
| Cow position: | chr3:20795645-20795435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 592-792 | 
| Cow position: | chr3:10412593-10412393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 84, 15 | 
| Conread position: | 595-797 | 
| Cow position: | chr3:8391700-8391507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 81, 48 | 
| Conread position: | 597-797 | 
| Cow position: | chr3:27782979-27783164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 6, 58 | 
| Conread position: | 598-796 | 
| Cow position: | chr3:53414359-53414159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 78, 9 | 
| Conread position: | 599-796 | 
| Cow position: | chr3:44101389-44101195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 72, 27 | 
| Conread position: | 600-797 | 
| Cow position: | chr3:7677829-7677635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 81, 36 | 
| Conread position: | 600-797 | 
| Cow position: | chr3:59332923-59332723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 78, 60 | 
| Conread position: | 601-793 | 
| Cow position: | chr3:35342989-35342796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:822751-822948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:2572866-2572669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:2834200-2834397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:6529331-6529134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:11417885-11417688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:12665476-12665279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:13035157-13035354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:14212729-14212532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:15416805-15416608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:18862779-18862582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:21593621-21593426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:21779439-21779636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:26891829-26891632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:28471692-28471495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:30623213-30623016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:32490374-32490571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:34015750-34015553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:35043498-35043301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:36417078-36416881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:37894170-37893973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:41018972-41019172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:43084578-43084385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 76, 102 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:45675439-45675636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:49931174-49930977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:53788187-53787990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:55245882-55245685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:56484921-56485118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:65536453-65536256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:68274179-68273982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:70215510-70215313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr3:76864770-76864573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 602-797 | 
| Cow position: | chr3:77726788-77726597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 80, 117 | 
| Conread position: | 604-796 | 
| Cow position: | chr3:16657539-16657726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 72, 110 | 
| Conread position: | 606-791 | 
| Cow position: | chr3:77226065-77225881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 611-797 | 
| Cow position: | chr3:32412158-32412344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 65, 13 | 
| Conread position: | 612-797 | 
| Cow position: | chr3:4191609-4191795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 612-797 | 
| Cow position: | chr3:31120809-31120995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 632-797 | 
| Cow position: | chr3:48362244-48362079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 39, 59 | 
| Conread position: | 633-797 | 
| Cow position: | chr3:44536681-44536846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 634-797 | 
| Cow position: | chr3:51548065-51547901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 636-797 | 
| Cow position: | chr3:22339210-22339050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 641-797 | 
| Cow position: | chr3:57996857-57996700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 643-797 | 
| Cow position: | chr3:33691753-33691908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 656-797 | 
| Cow position: | chr3:7772734-7772875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 20, 93 | 
Show alignments to all cow chromosomes.
