Cow genome map
| Conread name: | Lng1-LNG010047D04 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:43585842-43585633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 94, 19 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:54218262-54218036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 102, 30 | 
| Conread position: | 1-239 | 
| Cow position: | chr6:1914224-1913991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 109, 30 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:14707145-14707394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 89, 32 | 
| Conread position: | 1-256 | 
| Cow position: | chr6:22017436-22017695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 90, 30 | 
| Conread position: | 1-260 | 
| Cow position: | chr6:52189256-52189515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 117, 30 | 
| Conread position: | 1-261 | 
| Cow position: | chr6:42945405-42945152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 59, 30 | 
| Conread position: | 1-263 | 
| Cow position: | chr6:29084656-29084916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 30 | 
| Conread position: | 1-264 | 
| Cow position: | chr6:1077517-1077782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 103, 26 | 
| Conread position: | 1-264 | 
| Cow position: | chr6:36918578-36918835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 103, 30 | 
| Conread position: | 1-265 | 
| Cow position: | chr6:1095993-1096263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 103, 31 | 
| Conread position: | 1-326 | 
| Cow position: | chr6:4274784-4274448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 102, 30 | 
| Conread position: | 1-328 | 
| Cow position: | chr6:16596733-16596407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 117, 30 | 
| Conread position: | 1-335 | 
| Cow position: | chr6:2582353-2582021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 100, 15 | 
| Conread position: | 1-335 | 
| Cow position: | chr6:47988655-47988334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 133, 30 | 
| Conread position: | 1-338 | 
| Cow position: | chr6:63197580-63197913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 30, 8 | 
| Conread position: | 2-244 | 
| Cow position: | chr6:47339770-47340005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 117, 20 | 
| Conread position: | 2-258 | 
| Cow position: | chr6:14289779-14290035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 98, 29 | 
| Conread position: | 2-264 | 
| Cow position: | chr6:16675410-16675152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 138, 29 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:59507934-59507607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 100, 29 | 
| Conread position: | 20-258 | 
| Cow position: | chr6:17932659-17932411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 38-187 | 
| Cow position: | chr6:65898456-65898612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 38-210 | 
| Cow position: | chr6:37389955-37389786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 123, 77 | 
| Conread position: | 38-264 | 
| Cow position: | chr6:50527216-50526982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 38-278 | 
| Cow position: | chr6:14929158-14928909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 65, 206 | 
| Conread position: | 38-280 | 
| Cow position: | chr6:63040621-63040873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 57, 232 | 
| Conread position: | 38-288 | 
| Cow position: | chr6:28147820-28147575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 72, 64 | 
| Conread position: | 38-325 | 
| Cow position: | chr6:6160288-6159990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 76, 281 | 
| Conread position: | 38-328 | 
| Cow position: | chr6:41232178-41231879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 72, 61 | 
| Conread position: | 39-264 | 
| Cow position: | chr6:17757599-17757377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 40-200 | 
| Cow position: | chr6:22011049-22011213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 40-335 | 
| Cow position: | chr6:16737583-16737260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 59, 298 | 
| Conread position: | 43-279 | 
| Cow position: | chr6:16645580-16645341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 56, 83 | 
| Conread position: | 48-229 | 
| Cow position: | chr6:39109674-39109862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 64, 169 | 
| Conread position: | 50-264 | 
| Cow position: | chr6:35825739-35825519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 53, 174 | 
| Conread position: | 222-797 | 
| Cow position: | chr6:1506748-1507324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 454, 0 | 
| Conread position: | 570-790 | 
| Cow position: | chr6:48947243-48947464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 9, 29 | 
| Conread position: | 577-797 | 
| Cow position: | chr6:33896235-33896454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 113, 120 | 
| Conread position: | 578-756 | 
| Cow position: | chr6:49733191-49733009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 578-797 | 
| Cow position: | chr6:28136157-28135938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 72, 82 | 
| Conread position: | 578-797 | 
| Cow position: | chr6:35601084-35600865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 98, 134 | 
| Conread position: | 578-797 | 
| Cow position: | chr6:54358118-54358332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 98, 41 | 
| Conread position: | 580-793 | 
| Cow position: | chr6:62665179-62664965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:1109412-1109193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:4903597-4903810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 91, 116 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:7448899-7448681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:7467247-7467464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 96, 109 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:9322405-9322189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:10695125-10694908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 96, 76 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:12997823-12997607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 96, 121 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:14928855-14928645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:17111762-17111979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:23568189-23568407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:23879654-23879870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 63, 21 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:43621135-43620917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:46948220-46948004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 96, 127 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:47039807-47040023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 96, 61 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:51674170-51673958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 96, 104 | 
| Conread position: | 580-797 | 
| Cow position: | chr6:53672737-53672521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 96, 168 | 
| Conread position: | 586-797 | 
| Cow position: | chr6:6034400-6034611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 90, 127 | 
| Conread position: | 586-797 | 
| Cow position: | chr6:6568833-6569045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 586-797 | 
| Cow position: | chr6:21712104-21711892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 586-797 | 
| Cow position: | chr6:33466355-33466144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 90, 108 | 
| Conread position: | 587-797 | 
| Cow position: | chr6:16766445-16766654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 89, 152 | 
| Conread position: | 587-797 | 
| Cow position: | chr6:59619473-59619262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 588-797 | 
| Cow position: | chr6:45901596-45901806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 588-797 | 
| Cow position: | chr6:60379559-60379349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 589-795 | 
| Cow position: | chr6:28156875-28157077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 66, 91 | 
| Conread position: | 589-797 | 
| Cow position: | chr6:45793128-45792919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 191, 137 | 
| Conread position: | 593-797 | 
| Cow position: | chr6:17149776-17149981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 13, 7 | 
| Conread position: | 595-797 | 
| Cow position: | chr6:52249125-52249328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 600-797 | 
| Cow position: | chr6:65868168-65867970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 601-793 | 
| Cow position: | chr6:9234894-9234701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-793 | 
| Cow position: | chr6:56451712-56451905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:508138-508336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:888940-888743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:6557344-6557147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:10044598-10044401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:17386906-17386709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:20581393-20581590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:21163686-21163489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:22737323-22737520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:25374725-25374922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:27939416-27939220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 75, 15 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:31912792-31912989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:31941250-31941053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:33809051-33809248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:36230143-36230340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:45479705-45479902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:45975882-45975685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:48882130-48881933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:52065738-52065935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:53537459-53537262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:55361412-55361609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:57521558-57521361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:61829612-61829415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:63177426-63177229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:67173939-67173741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 71, 104 | 
| Conread position: | 601-797 | 
| Cow position: | chr6:67448543-67448740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 603-797 | 
| Cow position: | chr6:32664721-32664916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 604-796 | 
| Cow position: | chr6:4274449-4274257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 77, 110 | 
| Conread position: | 604-797 | 
| Cow position: | chr6:2875654-2875848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 623-797 | 
| Cow position: | chr6:33984173-33984002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 48, 27 | 
| Conread position: | 655-797 | 
| Cow position: | chr6:19718914-19718771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
Show alignments to all cow chromosomes.
