Cow genome map

Conread name: Lng1-LNG010047D04

Conread position: 1-181
Cow position: chr7:66749396-66749573 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 30

Conread position: 1-246
Cow position: chr7:60574617-60574373 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 30

Conread position: 1-256
Cow position: chr7:35753211-35753467 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 102, 30

Conread position: 1-258
Cow position: chr7:22357892-22358135 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 1-264
Cow position: chr7:23477705-23477966 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 90, 30

Conread position: 1-264
Cow position: chr7:39020498-39020758 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 102, 30

Conread position: 1-265
Cow position: chr7:32277126-32276864 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 30

Conread position: 1-310
Cow position: chr7:29280397-29280721 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 30

Conread position: 1-310
Cow position: chr7:29509569-29509244 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 118, 30

Conread position: 1-325
Cow position: chr7:38145070-38145395 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 118, 30

Conread position: 1-326
Cow position: chr7:68264090-68263765 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 104, 31

Conread position: 1-327
Cow position: chr7:34422703-34423023 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 30

Conread position: 2-250
Cow position: chr7:34245120-34244868 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 131, 29

Conread position: 2-264
Cow position: chr7:25023906-25024161 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 2-336
Cow position: chr7:39513142-39513475 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 101, 27

Conread position: 6-264
Cow position: chr7:4156215-4156459 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 38-255
Cow position: chr7:61551465-61551244 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 72, 64

Conread position: 38-265
Cow position: chr7:21423569-21423805 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 72, 61

Conread position: 38-265
Cow position: chr7:61824275-61824510 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 190

Conread position: 38-277
Cow position: chr7:21326624-21326378 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 59, 0

Conread position: 38-310
Cow position: chr7:46749777-46749482 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 72, 66

Conread position: 38-320
Cow position: chr7:51019363-51019074 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 64, 128

Conread position: 38-327
Cow position: chr7:7107247-7107550 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 63, 128

Conread position: 38-331
Cow position: chr7:67760045-67759752 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 131

Conread position: 39-319
Cow position: chr7:21001981-21002277 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 82

Conread position: 39-322
Cow position: chr7:59986357-59986073 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 60, 77

Conread position: 40-274
Cow position: chr7:57220870-57221108 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 208

Conread position: 43-233
Cow position: chr7:30715680-30715869 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 95, 85

Conread position: 578-782
Cow position: chr7:3389017-3388819 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 172, 17

Conread position: 578-794
Cow position: chr7:59712742-59712523 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 74, 0

Conread position: 578-795
Cow position: chr7:26196529-26196751 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 160

Conread position: 578-795
Cow position: chr7:52801111-52801329 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 93, 0

Conread position: 578-797
Cow position: chr7:23130299-23130079 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 166

Conread position: 578-797
Cow position: chr7:37520976-37520756 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 578-797
Cow position: chr7:48860240-48860460 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 121

Conread position: 578-797
Cow position: chr7:51630496-51630279 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 92, 0

Conread position: 579-797
Cow position: chr7:65496225-65496441 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 16

Conread position: 580-797
Cow position: chr7:12416-12634 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr7:54654-54872 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr7:3634250-3634468 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr7:22792355-22792138 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 96, 68

Conread position: 580-797
Cow position: chr7:37190162-37189944 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr7:40203490-40203272 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 586-797
Cow position: chr7:6666990-6666778 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 586-797
Cow position: chr7:41444505-41444300 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 85, 70

Conread position: 587-797
Cow position: chr7:18871518-18871730 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 589-792
Cow position: chr7:63947631-63947835 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 591-794
Cow position: chr7:30415272-30415072 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 9, 30

Conread position: 592-796
Cow position: chr7:30306293-30306095 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 592-797
Cow position: chr7:48722598-48722805 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 50

Conread position: 595-797
Cow position: chr7:61824575-61824776 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 12

Conread position: 598-757
Cow position: chr7:22879509-22879350 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 78, 121

Conread position: 600-797
Cow position: chr7:41463509-41463311 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 76, 0

Conread position: 601-792
Cow position: chr7:18865467-18865275 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:845396-845199 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 601-797
Cow position: chr7:14131583-14131386 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:14539103-14538906 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:19398724-19398918 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 601-797
Cow position: chr7:20435307-20435114 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 98

Conread position: 601-797
Cow position: chr7:21323736-21323539 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:22598490-22598293 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:24827302-24827105 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:25230504-25230309 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 32

Conread position: 601-797
Cow position: chr7:25416410-25416213 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:27098796-27098993 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 601-797
Cow position: chr7:29382384-29382187 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:34229257-34229454 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:37519839-37520036 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 601-797
Cow position: chr7:45100476-45100279 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:46266636-46266445 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 601-797
Cow position: chr7:54807875-54808071 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 111

Conread position: 601-797
Cow position: chr7:54822947-54823144 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:58614043-58613849 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 30

Conread position: 601-797
Cow position: chr7:60279443-60279640 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr7:65712121-65711924 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 602-797
Cow position: chr7:50535813-50536009 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 603-793
Cow position: chr7:65556946-65557136 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 73, 13

Conread position: 603-797
Cow position: chr7:65431439-65431634 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 604-797
Cow position: chr7:64012897-64012703 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 605-797
Cow position: chr7:19043750-19043943 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 606-797
Cow position: chr7:44597467-44597657 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 101

Conread position: 616-797
Cow position: chr7:20150269-20150451 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 616-797
Cow position: chr7:21567986-21568163 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 102, 19

Conread position: 629-797
Cow position: chr7:44590624-44590793 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 634-797
Cow position: chr7:31259516-31259680 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 646-797
Cow position: chr7:19457192-19457344 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.