Cow genome map

Conread name: Lng1-LNG010047D04

Conread position: 1-181
Cow position: chr9:19382811-19382990 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 30

Conread position: 1-182
Cow position: chr9:422695-422873 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 30

Conread position: 1-253
Cow position: chr9:35225353-35225606 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 106, 30

Conread position: 1-264
Cow position: chr9:29338561-29338307 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 102, 30

Conread position: 1-318
Cow position: chr9:47836447-47836131 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 102, 28

Conread position: 1-326
Cow position: chr9:34523697-34524030 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 30

Conread position: 1-337
Cow position: chr9:15950331-15950006 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 133, 30

Conread position: 2-195
Cow position: chr9:8741175-8741369 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 100, 29

Conread position: 2-310
Cow position: chr9:34553583-34553901 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 137, 29

Conread position: 28-274
Cow position: chr9:9247539-9247284 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 189

Conread position: 38-258
Cow position: chr9:19380124-19380357 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 117

Conread position: 38-275
Cow position: chr9:13313185-13312949 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 61

Conread position: 38-326
Cow position: chr9:125875-126181 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 61

Conread position: 38-334
Cow position: chr9:30675712-30675412 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 235

Conread position: 39-196
Cow position: chr9:62763711-62763872 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 48-248
Cow position: chr9:10111592-10111386 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 577-794
Cow position: chr9:21461796-21461581 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 63

Conread position: 579-797
Cow position: chr9:30439728-30439511 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 97, 37

Conread position: 580-795
Cow position: chr9:12847971-12848187 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 91, 69

Conread position: 580-795
Cow position: chr9:23421916-23421703 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 58

Conread position: 580-797
Cow position: chr9:388740-388520 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 62

Conread position: 580-797
Cow position: chr9:1099927-1099709 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr9:1838283-1838070 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 96, 50

Conread position: 580-797
Cow position: chr9:2857176-2856959 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 96, 169

Conread position: 580-797
Cow position: chr9:28773937-28774152 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 580-797
Cow position: chr9:28785675-28785459 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 580-797
Cow position: chr9:47045280-47045062 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr9:48794959-48795177 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr9:50327029-50326811 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr9:51692287-51692505 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 580-797
Cow position: chr9:53777025-53776808 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 91, 111

Conread position: 580-797
Cow position: chr9:54459169-54459387 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 580-797
Cow position: chr9:59540764-59540558 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 23

Conread position: 582-795
Cow position: chr9:24996693-24996490 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 102

Conread position: 586-797
Cow position: chr9:13312884-13312678 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 586-797
Cow position: chr9:41312714-41312926 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 587-797
Cow position: chr9:12260039-12260250 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 588-796
Cow position: chr9:42902111-42902319 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 150

Conread position: 588-797
Cow position: chr9:174449-174658 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 19

Conread position: 588-797
Cow position: chr9:3052590-3052380 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 588-797
Cow position: chr9:18243658-18243868 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 589-797
Cow position: chr9:9872263-9872054 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 590-794
Cow position: chr9:8601568-8601771 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 50

Conread position: 590-796
Cow position: chr9:8738322-8738529 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 109

Conread position: 593-795
Cow position: chr9:47263362-47263156 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 596-793
Cow position: chr9:46670244-46670050 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 598-793
Cow position: chr9:11744374-11744568 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 91

Conread position: 598-797
Cow position: chr9:1405122-1404924 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 163

Conread position: 600-797
Cow position: chr9:3222781-3222586 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 601-795
Cow position: chr9:37908159-37907964 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:1062384-1062581 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 601-797
Cow position: chr9:1070972-1071169 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:5452328-5452525 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:7103919-7104116 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:7830594-7830788 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 601-797
Cow position: chr9:9210455-9210258 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:13187516-13187319 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:18831044-18830853 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 87

Conread position: 601-797
Cow position: chr9:22755609-22755809 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 601-797
Cow position: chr9:23028718-23028915 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 24, 29

Conread position: 601-797
Cow position: chr9:24423834-24423637 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:28681512-28681315 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 601-797
Cow position: chr9:35565227-35565424 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:35624626-35624429 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:36829740-36829937 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:37253716-37253519 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:39303241-39303438 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:43494360-43494163 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:43496446-43496249 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:45792160-45791963 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:49259195-49259392 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:50840744-50840547 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:52526463-52526266 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:59495871-59496068 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:60409714-60409517 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 601-797
Cow position: chr9:62817909-62818106 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 603-797
Cow position: chr9:9623244-9623053 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 86

Conread position: 603-797
Cow position: chr9:54997183-54996988 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 68, 94

Conread position: 604-794
Cow position: chr9:1938731-1938917 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 44

Conread position: 604-796
Cow position: chr9:52001801-52001994 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 0

Conread position: 605-797
Cow position: chr9:43856231-43856423 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 59

Conread position: 608-790
Cow position: chr9:30281716-30281894 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 44

Conread position: 634-797
Cow position: chr9:34460324-34460488 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 636-797
Cow position: chr9:9021328-9021490 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 656-797
Cow position: chr9:9261628-9261489 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 46

Conread position: 657-797
Cow position: chr9:15802655-15802514 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.