Cow genome map


           Conread name:
           Lng1-LNG010047D04
        

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               139, 30
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               27-214
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               38-262
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 188
               

               Conread position:
               38-262
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               38-263
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               38-326
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 161
               

               Conread position:
               38-338
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               73, 113
               

               Conread position:
               40-250
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               65, 181
               

               Conread position:
               40-283
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 62
               

               Conread position:
               45-263
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 121
               

               Conread position:
               47-200
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 62
               

               Conread position:
               53-205
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               577-795
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               577-796
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               577-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               577-797
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               99, 176
               

               Conread position:
               578-774
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 136
               

               Conread position:
               578-785
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               578-795
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               578-795
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 84
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               98, 198
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               98, 124
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               98, 182
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               580-793
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               96, 48
               

               Conread position:
               580-796
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-796
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               96, 163
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               580-797
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 117
               

               Conread position:
               581-797
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               582-797
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               94, 121
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               586-797
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 71
               

               Conread position:
               588-796
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               589-796
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               592-797
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               91, 178
               

               Conread position:
               595-797
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               88, 177
               

               Conread position:
               600-797
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               601-781
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               601-793
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-796
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               75, 49
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               601-797
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               603-797
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               604-797
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               604-797
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               72, 119
               

               Conread position:
               619-797
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               641-797
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               643-797
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               655-797
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               656-797
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               
Show alignments to all cow chromosomes.