Cow genome map
| Conread name: | Lng1-LNG010048F06 |
| Conread position: | 33-308 |
| Cow position: | chr1:29099916-29099640 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 50-310 |
| Cow position: | chr1:87757589-87757333 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 55-310 |
| Cow position: | chr1:48321608-48321363 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 6 |
| Conread position: | 65-220 |
| Cow position: | chr1:77942870-77942715 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 103 |
| Conread position: | 67-206 |
| Cow position: | chr1:47365257-47365397 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 67-310 |
| Cow position: | chr1:98413028-98412789 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 69-313 |
| Cow position: | chr1:32501150-32501392 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 92 |
| Conread position: | 71-223 |
| Cow position: | chr1:30086400-30086250 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 111 |
| Conread position: | 71-225 |
| Cow position: | chr1:81642197-81642043 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 71-232 |
| Cow position: | chr1:17635019-17634855 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 71-279 |
| Cow position: | chr1:83120654-83120859 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 157 |
| Conread position: | 71-308 |
| Cow position: | chr1:39297482-39297713 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 223, 46 |
| Conread position: | 71-310 |
| Cow position: | chr1:32496216-32496443 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 71-310 |
| Cow position: | chr1:91026052-91026280 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 207, 39 |
| Conread position: | 71-312 |
| Cow position: | chr1:89776840-89776602 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 74, 132 |
| Conread position: | 71-312 |
| Cow position: | chr1:93431140-93431362 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 75, 109 |
| Conread position: | 71-316 |
| Cow position: | chr1:78027848-78027604 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 73, 135 |
| Conread position: | 72-308 |
| Cow position: | chr1:75184941-75185174 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 74, 150 |
| Conread position: | 74-239 |
| Cow position: | chr1:100140333-100140501 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 74-302 |
| Cow position: | chr1:98880002-98879773 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 74-340 |
| Cow position: | chr1:5655427-5655163 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 76-310 |
| Cow position: | chr1:80315086-80315317 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 70, 150 |
| Conread position: | 77-285 |
| Cow position: | chr1:55117760-55117968 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 69, 194 |
| Conread position: | 78-313 |
| Cow position: | chr1:32284694-32284919 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 164, 38 |
| Conread position: | 82-316 |
| Cow position: | chr1:638208-638446 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 64, 151 |
| Conread position: | 98-270 |
| Cow position: | chr1:64752819-64752989 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 98-310 |
| Cow position: | chr1:101441118-101440911 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 53, 126 |
| Conread position: | 120-310 |
| Cow position: | chr1:33881039-33881230 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 128-310 |
| Cow position: | chr1:79839655-79839474 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 115, 133 |
| Conread position: | 128-311 |
| Cow position: | chr1:35434784-35434968 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 146 |
| Conread position: | 129-303 |
| Cow position: | chr1:76596149-76596324 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 142-310 |
| Cow position: | chr1:15983072-15982909 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 144-310 |
| Cow position: | chr1:55120379-55120221 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 152-310 |
| Cow position: | chr1:11335995-11335836 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.