Cow genome map
| Conread name: | Lng1-LNG010048F06 |
| Conread position: | 63-252 |
| Cow position: | chr17:20347309-20347126 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 67-321 |
| Cow position: | chr17:21591780-21591528 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 84, 93 |
| Conread position: | 70-310 |
| Cow position: | chr17:11051997-11052241 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 58, 88 |
| Conread position: | 70-310 |
| Cow position: | chr17:31562355-31562113 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 59, 208 |
| Conread position: | 71-245 |
| Cow position: | chr17:24997368-24997193 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 71-309 |
| Cow position: | chr17:17641876-17641634 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 71-310 |
| Cow position: | chr17:1491262-1491501 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 71-310 |
| Cow position: | chr17:11072270-11072506 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 75, 57 |
| Conread position: | 71-311 |
| Cow position: | chr17:16359940-16360177 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 80, 89 |
| Conread position: | 71-313 |
| Cow position: | chr17:4879195-4879436 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 71-313 |
| Cow position: | chr17:25546242-25545999 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 71-314 |
| Cow position: | chr17:24861647-24861887 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 71-316 |
| Cow position: | chr17:1730236-1730481 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 215 |
| Conread position: | 71-316 |
| Cow position: | chr17:27302350-27302105 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 80, 177 |
| Conread position: | 71-319 |
| Cow position: | chr17:15483758-15483512 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 157 |
| Conread position: | 78-309 |
| Cow position: | chr17:38189912-38189688 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 129 |
| Conread position: | 78-313 |
| Cow position: | chr17:1756934-1756698 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 80-289 |
| Cow position: | chr17:891692-891483 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 94 |
| Conread position: | 83-309 |
| Cow position: | chr17:21461130-21461354 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 90-296 |
| Cow position: | chr17:10636392-10636181 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 91-306 |
| Cow position: | chr17:16380554-16380338 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 106-313 |
| Cow position: | chr17:1325265-1325469 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 118-256 |
| Cow position: | chr17:5347947-5347808 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 119-309 |
| Cow position: | chr17:11124388-11124198 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 119-341 |
| Cow position: | chr17:24584045-24583821 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 128-310 |
| Cow position: | chr17:11244534-11244716 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 134 |
| Conread position: | 128-310 |
| Cow position: | chr17:27761235-27761417 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 122, 145 |
| Conread position: | 136-310 |
| Cow position: | chr17:6763140-6763317 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 142, 65 |
| Conread position: | 141-295 |
| Cow position: | chr17:34054059-34054211 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 150-310 |
| Cow position: | chr17:22836151-22835990 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
Show alignments to all cow chromosomes.