Cow genome map
| Conread name: | Lng1-LNG010048F06 |
| Conread position: | 63-308 |
| Cow position: | chrX:38741146-38740904 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 83, 139 |
| Conread position: | 65-223 |
| Cow position: | chrX:6999608-6999449 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 65-313 |
| Cow position: | chrX:832314-832070 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 67-222 |
| Cow position: | chrX:34635519-34635675 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 68-310 |
| Cow position: | chrX:38674909-38674665 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 70-327 |
| Cow position: | chrX:33159070-33158811 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 71-265 |
| Cow position: | chrX:40315863-40315668 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 71-310 |
| Cow position: | chrX:3450796-3451037 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 75, 160 |
| Conread position: | 71-310 |
| Cow position: | chrX:27529608-27529372 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 74, 129 |
| Conread position: | 71-310 |
| Cow position: | chrX:34704449-34704680 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 71-312 |
| Cow position: | chrX:1742930-1743175 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 71-316 |
| Cow position: | chrX:34767790-34768054 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 71-320 |
| Cow position: | chrX:35981697-35981453 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 75, 143 |
| Conread position: | 72-310 |
| Cow position: | chrX:29815819-29815582 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 73-280 |
| Cow position: | chrX:25180430-25180225 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 74-312 |
| Cow position: | chrX:3513271-3513508 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 75-225 |
| Cow position: | chrX:10062244-10062093 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 75-276 |
| Cow position: | chrX:37251484-37251283 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 156 |
| Conread position: | 75-314 |
| Cow position: | chrX:16893598-16893361 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 234, 67 |
| Conread position: | 77-186 |
| Cow position: | chrX:23320512-23320402 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 78-311 |
| Cow position: | chrX:38129239-38129478 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 86-308 |
| Cow position: | chrX:34213817-34213598 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 92-310 |
| Cow position: | chrX:29145481-29145266 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 121-252 |
| Cow position: | chrX:29539082-29538950 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 125-310 |
| Cow position: | chrX:36874174-36873991 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 155-308 |
| Cow position: | chrX:25179619-25179474 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 158-310 |
| Cow position: | chrX:33008531-33008383 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 195-313 |
| Cow position: | chrX:31911101-31911219 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.