Cow genome map
| Conread name: | Lng1-LNG010062C07 |
| Conread position: | 2-571 |
| Cow position: | chr12:21254991-21254425 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 24 |
| Conread position: | 2-571 |
| Cow position: | chr12:32653211-32653775 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 22 |
| Conread position: | 4-568 |
| Cow position: | chr12:21499784-21500331 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 48 |
| Conread position: | 10-478 |
| Cow position: | chr12:8982737-8982287 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 13-327 |
| Cow position: | chr12:22026433-22026733 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 17-571 |
| Cow position: | chr12:21901627-21902170 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 26 |
| Conread position: | 25-479 |
| Cow position: | chr12:16326418-16326836 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 318 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 25-570 |
| Cow position: | chr12:22332307-22332854 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 90 |
| Conread position: | 26-463 |
| Cow position: | chr12:1137283-1137706 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 27-331 |
| Cow position: | chr12:48404737-48405033 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 99 |
| Conread position: | 27-569 |
| Cow position: | chr12:21941466-21941993 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 95 |
| Conread position: | 27-569 |
| Cow position: | chr12:37558247-37558785 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 97 |
| Conread position: | 28-483 |
| Cow position: | chr12:26141502-26141956 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 209 |
| Conread position: | 28-573 |
| Cow position: | chr12:2282233-2282779 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 216 |
| Conread position: | 28-573 |
| Cow position: | chr12:25101370-25100828 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 96 |
| Conread position: | 32-573 |
| Cow position: | chr12:252364-251825 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 160 |
| Conread position: | 33-496 |
| Cow position: | chr12:347530-347984 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 24 |
| Conread position: | 33-514 |
| Cow position: | chr12:21207391-21207867 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 91 |
| Conread position: | 33-570 |
| Cow position: | chr12:21426390-21426924 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 113 |
| Conread position: | 33-571 |
| Cow position: | chr12:2492-3031 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 205 |
| Conread position: | 33-571 |
| Cow position: | chr12:3360607-3361135 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 69 |
| Conread position: | 33-571 |
| Cow position: | chr12:8310878-8311412 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 203 |
| Conread position: | 33-571 |
| Cow position: | chr12:43031689-43031154 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 191 |
| Conread position: | 33-571 |
| Cow position: | chr12:45261300-45261854 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 34-477 |
| Cow position: | chr12:14693349-14693767 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 382, 107 |
| Conread position: | 34-561 |
| Cow position: | chr12:20998426-20997912 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 196 |
| Conread position: | 34-571 |
| Cow position: | chr12:11097936-11098473 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 204 |
| Conread position: | 34-573 |
| Cow position: | chr12:1402188-1402723 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 90 |
| Conread position: | 34-573 |
| Cow position: | chr12:6406952-6406418 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 196 |
| Conread position: | 34-573 |
| Cow position: | chr12:8678424-8677888 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 90 |
| Conread position: | 34-573 |
| Cow position: | chr12:22206050-22205515 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 121 |
| Conread position: | 34-573 |
| Cow position: | chr12:42860120-42859594 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 157 |
| Conread position: | 35-570 |
| Cow position: | chr12:14662915-14662403 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 121 |
| Conread position: | 35-573 |
| Cow position: | chr12:27933250-27932712 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 203 |
| Conread position: | 36-559 |
| Cow position: | chr12:15951559-15951044 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 91 |
| Conread position: | 36-573 |
| Cow position: | chr12:21227753-21227217 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 65-573 |
| Cow position: | chr12:28766291-28765786 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 126 |
| Conread position: | 117-562 |
| Cow position: | chr12:26947202-26946763 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 131-554 |
| Cow position: | chr12:17975341-17975751 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 167-573 |
| Cow position: | chr12:3632427-3632031 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 310, 74 |
| Conread position: | 238-570 |
| Cow position: | chr12:18500945-18501261 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 249-573 |
| Cow position: | chr12:34854885-34854571 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 266, 25 |
| Conread position: | 295-578 |
| Cow position: | chr12:2838903-2838617 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 216 |
| Conread position: | 314-569 |
| Cow position: | chr12:21197930-21198189 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 319-512 |
| Cow position: | chr12:48405248-48405443 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 346-570 |
| Cow position: | chr12:33986166-33986392 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 397-569 |
| Cow position: | chr12:5861209-5861383 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 47, 77 |
Show alignments to all cow chromosomes.