Cow genome map

Conread name: Lng1-LNG010062C07

Conread position: 2-514
Cow position: chr13:30245291-30244781 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 29

Conread position: 2-555
Cow position: chr13:2297354-2296817 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 70

Conread position: 2-571
Cow position: chr13:21840753-21840184 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 235

Conread position: 4-334
Cow position: chr13:46732907-46732587 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 226, 122

Conread position: 13-568
Cow position: chr13:60701820-60701291 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 358
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 311, 46

Conread position: 17-155
Cow position: chr13:34767774-34767646 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 27-276
Cow position: chr13:3058526-3058281 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 209, 0

Conread position: 27-465
Cow position: chr13:33928091-33927667 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 23

Conread position: 27-571
Cow position: chr13:2389327-2388808 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 98

Conread position: 27-571
Cow position: chr13:4872546-4873086 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 97

Conread position: 27-571
Cow position: chr13:32986579-32986047 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 23

Conread position: 27-571
Cow position: chr13:50108933-50109472 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 97

Conread position: 27-571
Cow position: chr13:58261580-58262117 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 345
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 47

Conread position: 28-478
Cow position: chr13:30140456-30140911 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 168

Conread position: 28-571
Cow position: chr13:62328114-62327574 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 197

Conread position: 28-572
Cow position: chr13:3654845-3654315 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 211

Conread position: 28-573
Cow position: chr13:30063613-30064134 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 90

Conread position: 29-571
Cow position: chr13:2908975-2908439 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 97

Conread position: 29-571
Cow position: chr13:34692632-34693175 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 50

Conread position: 30-406
Cow position: chr13:2232129-2232503 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 207

Conread position: 31-396
Cow position: chr13:34868239-34868606 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 31-571
Cow position: chr13:34936610-34937158 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 33-477
Cow position: chr13:23410523-23410091 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 286
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 109

Conread position: 33-571
Cow position: chr13:3276632-3277164 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 18

Conread position: 33-571
Cow position: chr13:17307953-17308485 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 91

Conread position: 33-571
Cow position: chr13:31832081-31832610 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 91

Conread position: 33-571
Cow position: chr13:34143184-34142648 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 98

Conread position: 33-571
Cow position: chr13:34187215-34186677 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 204

Conread position: 33-571
Cow position: chr13:34326203-34325665 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 89

Conread position: 33-571
Cow position: chr13:34911891-34911369 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 11

Conread position: 33-572
Cow position: chr13:20542888-20542364 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 33-573
Cow position: chr13:31734608-31734073 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 204

Conread position: 33-578
Cow position: chr13:19438427-19438950 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 349
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 197, 51

Conread position: 34-366
Cow position: chr13:32544422-32544744 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 285, 18

Conread position: 34-443
Cow position: chr13:30302546-30302944 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 61

Conread position: 34-538
Cow position: chr13:33336849-33336366 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 171

Conread position: 34-571
Cow position: chr13:15521040-15520505 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 204

Conread position: 34-571
Cow position: chr13:30657487-30656967 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 92

Conread position: 34-573
Cow position: chr13:1593681-1593143 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 155

Conread position: 34-573
Cow position: chr13:4940560-4941100 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 156

Conread position: 34-573
Cow position: chr13:9043984-9044512 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 145

Conread position: 34-573
Cow position: chr13:15924909-15924372 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 195

Conread position: 34-573
Cow position: chr13:31612862-31612324 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 207

Conread position: 34-573
Cow position: chr13:32738345-32737810 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 91

Conread position: 34-573
Cow position: chr13:34042891-34042357 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 156

Conread position: 35-569
Cow position: chr13:54284067-54284578 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 39

Conread position: 35-570
Cow position: chr13:6668649-6668114 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 203

Conread position: 35-573
Cow position: chr13:35756715-35757253 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 203

Conread position: 36-568
Cow position: chr13:2305979-2306501 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 115

Conread position: 36-571
Cow position: chr13:33825252-33824725 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 90

Conread position: 47-573
Cow position: chr13:31560680-31561199 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 55

Conread position: 58-573
Cow position: chr13:22186219-22185727 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 27

Conread position: 65-571
Cow position: chr13:13324262-13324759 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 62

Conread position: 69-570
Cow position: chr13:56730764-56730278 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 25

Conread position: 104-571
Cow position: chr13:49973226-49973694 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 133

Conread position: 110-559
Cow position: chr13:23003966-23003520 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 128

Conread position: 138-555
Cow position: chr13:35030125-35030546 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 267
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 122, 105

Conread position: 183-413
Cow position: chr13:15451862-15451649 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 170, 58

Conread position: 198-552
Cow position: chr13:34767638-34767296 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 251, 44

Conread position: 199-570
Cow position: chr13:3567423-3567803 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 25

Conread position: 241-441
Cow position: chr13:48356977-48357183 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 163

Conread position: 263-465
Cow position: chr13:10114954-10114750 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 161

Conread position: 270-573
Cow position: chr13:4483510-4483806 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 8, 37

Conread position: 272-571
Cow position: chr13:47230279-47229977 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 17

Conread position: 305-565
Cow position: chr13:4178909-4178647 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 134, 0

Conread position: 306-573
Cow position: chr13:46732478-46732216 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 76

Conread position: 319-573
Cow position: chr13:16343459-16343206 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 134

Conread position: 391-571
Cow position: chr13:60466165-60466347 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.