Cow genome map

Conread name: Lng1-LNG010062C07

Conread position: 1-571
Cow position:
Alignm length: 575
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 57

Conread position: 2-571
Cow position:
Alignm length: 574
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 31

Conread position: 3-447
Cow position:
Alignm length: 451
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 72

Conread position: 24-573
Cow position:
Alignm length: 557
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 102

Conread position: 26-552
Cow position:
Alignm length: 531
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 186

Conread position: 26-570
Cow position:
Alignm length: 551
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 7

Conread position: 26-571
Cow position:
Alignm length: 549
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 157

Conread position: 26-573
Cow position:
Alignm length: 557
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 7

Conread position: 27-447
Cow position:
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 170

Conread position: 27-566
Cow position:
Alignm length: 547
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 118

Conread position: 27-568
Cow position:
Alignm length: 549
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 23

Conread position: 27-571
Cow position:
Alignm length: 552
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 210

Conread position: 27-571
Cow position:
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 97

Conread position: 27-571
Cow position:
Alignm length: 547
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 87

Conread position: 27-571
Cow position:
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 210

Conread position: 27-573
Cow position:
Alignm length: 552
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 12

Conread position: 27-573
Cow position:
Alignm length: 548
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 513, 92

Conread position: 27-573
Cow position:
Alignm length: 551
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 13

Conread position: 28-570
Cow position:
Alignm length: 549
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 96

Conread position: 28-571
Cow position:
Alignm length: 546
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 90

Conread position: 28-571
Cow position:
Alignm length: 554
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 141

Conread position: 31-479
Cow position:
Alignm length: 451
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 156

Conread position: 31-573
Cow position:
Alignm length: 549
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 213

Conread position: 33-446
Cow position:
Alignm length: 430
Alignm identity: 285
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 178

Conread position: 33-479
Cow position:
Alignm length: 451
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 65

Conread position: 33-569
Cow position:
Alignm length: 556
Alignm identity: 358
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 191, 98

Conread position: 33-570
Cow position:
Alignm length: 542
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 204

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 204

Conread position: 33-571
Cow position:
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 100

Conread position: 33-571
Cow position:
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 11

Conread position: 33-571
Cow position:
Alignm length: 544
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 208

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 193

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 131

Conread position: 33-571
Cow position:
Alignm length: 571
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 65

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 196

Conread position: 33-571
Cow position:
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 201

Conread position: 33-571
Cow position:
Alignm length: 545
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 207

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 91

Conread position: 33-572
Cow position:
Alignm length: 556
Alignm identity: 359
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 10, 31

Conread position: 33-573
Cow position:
Alignm length: 543
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 91

Conread position: 33-573
Cow position:
Alignm length: 562
Alignm identity: 362
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 148

Conread position: 34-520
Cow position:
Alignm length: 489
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 157

Conread position: 34-539
Cow position:
Alignm length: 510
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 34-553
Cow position:
Alignm length: 526
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 90

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 122

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 340
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 152, 30

Conread position: 34-573
Cow position:
Alignm length: 543
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 118

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 204

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 52

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 170

Conread position: 34-573
Cow position:
Alignm length: 544
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 204

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 204

Conread position: 34-573
Cow position:
Alignm length: 544
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 158

Conread position: 35-571
Cow position:
Alignm length: 557
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 24

Conread position: 35-573
Cow position:
Alignm length: 543
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 8

Conread position: 35-573
Cow position:
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 80

Conread position: 36-569
Cow position:
Alignm length: 536
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 27

Conread position: 36-573
Cow position:
Alignm length: 546
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 37

Conread position: 39-570
Cow position:
Alignm length: 536
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 196

Conread position: 47-591
Cow position:
Alignm length: 555
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 184

Conread position: 52-571
Cow position:
Alignm length: 532
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 71

Conread position: 52-573
Cow position:
Alignm length: 530
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 74

Conread position: 58-382
Cow position:
Alignm length: 330
Alignm identity: 226
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 202, 18

Conread position: 62-573
Cow position:
Alignm length: 516
Alignm identity: 340
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 97, 24

Conread position: 66-573
Cow position:
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 75

Conread position: 68-570
Cow position:
Alignm length: 505
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 59

Conread position: 95-522
Cow position:
Alignm length: 434
Alignm identity: 265
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 110, 96

Conread position: 104-570
Cow position:
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 133

Conread position: 107-573
Cow position:
Alignm length: 472
Alignm identity: 294
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 236, 20

Conread position: 109-571
Cow position:
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 128

Conread position: 117-573
Cow position:
Alignm length: 466
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 91

Conread position: 118-573
Cow position:
Alignm length: 461
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 111

Conread position: 127-571
Cow position:
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 116

Conread position: 144-447
Cow position:
Alignm length: 307
Alignm identity: 195
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 173, 28

Conread position: 154-538
Cow position:
Alignm length: 387
Alignm identity: 254
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 163, 71

Conread position: 160-374
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 105, 71

Conread position: 167-573
Cow position:
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 191-571
Cow position:
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 11

Conread position: 204-447
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 229, 22

Conread position: 204-572
Cow position:
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 37

Conread position: 238-464
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 23

Conread position: 238-573
Cow position:
Alignm length: 342
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 272

Conread position: 238-573
Cow position:
Alignm length: 343
Alignm identity: 231
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 38

Conread position: 243-573
Cow position:
Alignm length: 336
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 33

Conread position: 246-570
Cow position:
Alignm length: 328
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 68

Conread position: 270-571
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 56

Conread position: 272-571
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 41

Conread position: 292-569
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 34

Conread position: 298-571
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 26, 50

Conread position: 319-570
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 24

Conread position: 345-573
Cow position:
Alignm length: 230
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 194, 104

Conread position: 356-571
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 88, 19

Conread position: 362-570
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 364-571
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 79, 197

Conread position: 371-573
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 128, 16

Conread position: 376-571
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 52

Conread position: 392-573
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 5

Conread position: 394-573
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 420-571
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 422-573
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.