Cow genome map
Conread name: | Lng1-LNG010062C07 |
Conread position: | 1-571 |
Cow position: | chr16:51685414-51685975 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 69 |
Conread position: | 4-434 |
Cow position: | chr16:54647301-54647718 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 20 |
Conread position: | 17-537 |
Cow position: | chr16:36232617-36232110 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 107 |
Conread position: | 17-571 |
Cow position: | chr16:32935129-32935714 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 109 |
Conread position: | 18-501 |
Cow position: | chr16:40887280-40886791 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 64 |
Conread position: | 18-573 |
Cow position: | chr16:31376245-31375740 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 302, 58 |
Conread position: | 19-395 |
Cow position: | chr16:52815635-52815275 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 328, 95 |
Conread position: | 23-561 |
Cow position: | chr16:42051359-42050857 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 63 |
Conread position: | 27-310 |
Cow position: | chr16:16687867-16688146 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 192 |
Conread position: | 27-437 |
Cow position: | chr16:32605825-32606233 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 210 |
Conread position: | 27-476 |
Cow position: | chr16:54180680-54180232 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 311 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 127, 15 |
Conread position: | 27-478 |
Cow position: | chr16:4303472-4303031 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 93 |
Conread position: | 27-570 |
Cow position: | chr16:5918482-5919022 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 210 |
Conread position: | 27-571 |
Cow position: | chr16:6942620-6943172 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 210 |
Conread position: | 27-573 |
Cow position: | chr16:9929554-9930080 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 97 |
Conread position: | 27-573 |
Cow position: | chr16:24155432-24154902 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 23 |
Conread position: | 28-409 |
Cow position: | chr16:29676308-29675934 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 210 |
Conread position: | 28-468 |
Cow position: | chr16:56164804-56165237 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 278 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 37, 42 |
Conread position: | 28-565 |
Cow position: | chr16:47562687-47563225 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 101 |
Conread position: | 28-573 |
Cow position: | chr16:25440619-25441166 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 12 |
Conread position: | 31-570 |
Cow position: | chr16:11052173-11052699 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 94 |
Conread position: | 31-570 |
Cow position: | chr16:42740419-42739885 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 22 |
Conread position: | 31-571 |
Cow position: | chr16:10808171-10808690 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 508, 18 |
Conread position: | 33-463 |
Cow position: | chr16:5888488-5888893 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 50 |
Conread position: | 33-551 |
Cow position: | chr16:2239726-2239212 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 41 |
Conread position: | 33-571 |
Cow position: | chr16:5660864-5661390 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 411, 204 |
Conread position: | 33-571 |
Cow position: | chr16:7905647-7906159 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 74 |
Conread position: | 33-571 |
Cow position: | chr16:20255303-20254771 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 27 |
Conread position: | 33-571 |
Cow position: | chr16:25084625-25085161 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 197 |
Conread position: | 33-571 |
Cow position: | chr16:25157213-25156683 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 104 |
Conread position: | 33-571 |
Cow position: | chr16:28171355-28170823 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 156 |
Conread position: | 33-571 |
Cow position: | chr16:49257560-49257043 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 49 |
Conread position: | 33-573 |
Cow position: | chr16:41559680-41560193 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 71 |
Conread position: | 33-574 |
Cow position: | chr16:6549517-6548981 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 41 |
Conread position: | 34-414 |
Cow position: | chr16:18688120-18687744 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 10 |
Conread position: | 34-433 |
Cow position: | chr16:1430232-1430623 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 174 |
Conread position: | 34-568 |
Cow position: | chr16:23982316-23982848 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 269, 204 |
Conread position: | 34-572 |
Cow position: | chr16:15491712-15492250 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 204 |
Conread position: | 34-573 |
Cow position: | chr16:408027-407489 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 101 |
Conread position: | 34-573 |
Cow position: | chr16:1568445-1567912 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 70 |
Conread position: | 34-573 |
Cow position: | chr16:2411965-2411427 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 280, 195 |
Conread position: | 34-573 |
Cow position: | chr16:2484132-2483600 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 90 |
Conread position: | 34-573 |
Cow position: | chr16:2728308-2727746 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 118 |
Conread position: | 34-573 |
Cow position: | chr16:8817100-8816562 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 122 |
Conread position: | 34-573 |
Cow position: | chr16:10204410-10203888 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 74 |
Conread position: | 34-573 |
Cow position: | chr16:10437262-10437785 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 90 |
Conread position: | 34-573 |
Cow position: | chr16:12538920-12538383 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 203 |
Conread position: | 34-573 |
Cow position: | chr16:15565755-15566286 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 157 |
Conread position: | 34-573 |
Cow position: | chr16:23253498-23252965 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 29 |
Conread position: | 34-573 |
Cow position: | chr16:25340976-25341507 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 10 |
Conread position: | 34-573 |
Cow position: | chr16:26662755-26663291 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 90 |
Conread position: | 34-573 |
Cow position: | chr16:27734800-27734260 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 205 |
Conread position: | 34-573 |
Cow position: | chr16:28472091-28471559 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 157 |
Conread position: | 34-573 |
Cow position: | chr16:29046025-29046564 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 208 |
Conread position: | 34-573 |
Cow position: | chr16:40297170-40296636 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 56 |
Conread position: | 34-573 |
Cow position: | chr16:43898264-43897729 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 208 |
Conread position: | 35-447 |
Cow position: | chr16:26518003-26517604 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 264 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 22, 71 |
Conread position: | 35-466 |
Cow position: | chr16:16276502-16276073 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 186 |
Conread position: | 35-573 |
Cow position: | chr16:15183812-15184345 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 89 |
Conread position: | 35-573 |
Cow position: | chr16:31592901-31592365 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 205 |
Conread position: | 36-571 |
Cow position: | chr16:31756-32278 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 403, 37 |
Conread position: | 36-571 |
Cow position: | chr16:36282405-36282937 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 182 |
Conread position: | 44-573 |
Cow position: | chr16:25458456-25457923 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 75 |
Conread position: | 55-570 |
Cow position: | chr16:25187668-25188181 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 264, 6 |
Conread position: | 64-568 |
Cow position: | chr16:36362313-36361825 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 81 |
Conread position: | 65-573 |
Cow position: | chr16:836073-836571 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 255, 15 |
Conread position: | 67-538 |
Cow position: | chr16:28438744-28438281 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 302 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 368, 68 |
Conread position: | 69-571 |
Cow position: | chr16:56551168-56551660 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 255, 168 |
Conread position: | 80-520 |
Cow position: | chr16:5651802-5652227 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 161 |
Conread position: | 86-574 |
Cow position: | chr16:39820695-39821173 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 40 |
Conread position: | 117-573 |
Cow position: | chr16:34529413-34529863 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 329, 126 |
Conread position: | 127-573 |
Cow position: | chr16:5483419-5483865 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 10 |
Conread position: | 129-573 |
Cow position: | chr16:335399-335831 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 17 |
Conread position: | 133-569 |
Cow position: | chr16:16029890-16030322 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 282 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 45, 26 |
Conread position: | 145-573 |
Cow position: | chr16:14666715-14666287 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 97 |
Conread position: | 162-357 |
Cow position: | chr16:30047657-30047849 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 44, 70 |
Conread position: | 245-573 |
Cow position: | chr16:10566069-10565740 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 217 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 75, 12 |
Conread position: | 266-569 |
Cow position: | chr16:44966402-44966704 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 206 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 40, 143 |
Conread position: | 268-573 |
Cow position: | chr16:9777317-9777627 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 93 |
Conread position: | 270-571 |
Cow position: | chr16:33611844-33611537 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 210 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 50, 118 |
Conread position: | 273-573 |
Cow position: | chr16:18500106-18499811 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 204 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 276-571 |
Cow position: | chr16:19713643-19713349 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 122 |
Conread position: | 331-569 |
Cow position: | chr16:49235848-49235613 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 177 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 113, 32 |
Conread position: | 337-570 |
Cow position: | chr16:53045657-53045893 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 348-569 |
Cow position: | chr16:48681760-48681539 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 146 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 349-573 |
Cow position: | chr16:41758131-41757906 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 155 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 189, 0 |
Conread position: | 396-571 |
Cow position: | chr16:52815124-52814951 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 49, 104 |
Conread position: | 410-571 |
Cow position: | chr16:29033094-29033257 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 127, 0 |
Show alignments to all cow chromosomes.