Cow genome map

Conread name: Lng1-LNG010062C07

Conread position: 2-570
Cow position:
Alignm length: 573
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 29

Conread position: 2-571
Cow position:
Alignm length: 592
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 29

Conread position: 4-573
Cow position:
Alignm length: 573
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 7

Conread position: 17-308
Cow position:
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 17-477
Cow position:
Alignm length: 464
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 16

Conread position: 17-565
Cow position:
Alignm length: 557
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 110

Conread position: 17-571
Cow position:
Alignm length: 561
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 7

Conread position: 21-255
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 25-571
Cow position:
Alignm length: 572
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 25

Conread position: 26-568
Cow position:
Alignm length: 546
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 56

Conread position: 26-571
Cow position:
Alignm length: 549
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 94

Conread position: 27-322
Cow position:
Alignm length: 296
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 202, 0

Conread position: 27-405
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 210

Conread position: 27-571
Cow position:
Alignm length: 549
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 6

Conread position: 27-571
Cow position:
Alignm length: 550
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 45

Conread position: 27-571
Cow position:
Alignm length: 549
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 208

Conread position: 28-515
Cow position:
Alignm length: 493
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 69

Conread position: 28-570
Cow position:
Alignm length: 547
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 209

Conread position: 28-571
Cow position:
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 213

Conread position: 29-571
Cow position:
Alignm length: 549
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 34

Conread position: 29-573
Cow position:
Alignm length: 551
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 101

Conread position: 33-308
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 204, 0

Conread position: 33-463
Cow position:
Alignm length: 433
Alignm identity: 275
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 57

Conread position: 33-471
Cow position:
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 175

Conread position: 33-529
Cow position:
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 25

Conread position: 33-565
Cow position:
Alignm length: 537
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 197

Conread position: 33-569
Cow position:
Alignm length: 539
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 193

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 89

Conread position: 33-571
Cow position:
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 93

Conread position: 33-571
Cow position:
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 98

Conread position: 33-571
Cow position:
Alignm length: 549
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 167

Conread position: 33-571
Cow position:
Alignm length: 552
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 134

Conread position: 33-574
Cow position:
Alignm length: 548
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 208

Conread position: 34-269
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 169, 157

Conread position: 34-290
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 81, 119

Conread position: 34-366
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 93

Conread position: 34-571
Cow position:
Alignm length: 541
Alignm identity: 340
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 19, 90

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 90

Conread position: 34-573
Cow position:
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 122

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 131

Conread position: 34-573
Cow position:
Alignm length: 543
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 208

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 31

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 34-573
Cow position:
Alignm length: 547
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 90

Conread position: 34-573
Cow position:
Alignm length: 547
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 212

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 204

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 90

Conread position: 36-569
Cow position:
Alignm length: 538
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 17

Conread position: 36-569
Cow position:
Alignm length: 538
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 88

Conread position: 37-571
Cow position:
Alignm length: 539
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 13

Conread position: 40-447
Cow position:
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 10

Conread position: 64-571
Cow position:
Alignm length: 515
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 63

Conread position: 67-570
Cow position:
Alignm length: 506
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 68

Conread position: 67-573
Cow position:
Alignm length: 513
Alignm identity: 329
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 60

Conread position: 96-295
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 142

Conread position: 98-570
Cow position:
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 81

Conread position: 104-571
Cow position:
Alignm length: 474
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 140

Conread position: 117-418
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 76

Conread position: 120-571
Cow position:
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 117

Conread position: 121-478
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 10

Conread position: 147-573
Cow position:
Alignm length: 441
Alignm identity: 282
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 222, 17

Conread position: 191-573
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 53

Conread position: 202-573
Cow position:
Alignm length: 376
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 40

Conread position: 238-562
Cow position:
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 264-571
Cow position:
Alignm length: 313
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 267-514
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 267-571
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 113

Conread position: 269-585
Cow position:
Alignm length: 319
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 170, 181

Conread position: 272-570
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 259

Conread position: 281-513
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 98

Conread position: 285-527
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 52

Conread position: 319-573
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 67

Conread position: 324-549
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 19

Conread position: 376-570
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 395-571
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 431-571
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 102

Show alignments to all cow chromosomes.