Cow genome map
| Conread name: | Lng1-LNG010062C07 |
| Conread position: | 1-571 |
| Cow position: | chr19:7341833-7342398 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 108 |
| Conread position: | 13-325 |
| Cow position: | chr19:561729-561425 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 30 |
| Conread position: | 15-573 |
| Cow position: | chr19:28581878-28581327 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 18-473 |
| Cow position: | chr19:20125397-20125839 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 20-571 |
| Cow position: | chr19:37680-38225 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 7 |
| Conread position: | 22-571 |
| Cow position: | chr19:32202539-32203069 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 355 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 202, 105 |
| Conread position: | 23-514 |
| Cow position: | chr19:39546411-39546895 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 27-259 |
| Cow position: | chr19:35376341-35376573 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 27-367 |
| Cow position: | chr19:32193362-32193702 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 211 |
| Conread position: | 27-477 |
| Cow position: | chr19:35979055-35979500 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 100 |
| Conread position: | 27-479 |
| Cow position: | chr19:30372069-30372511 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 91 |
| Conread position: | 27-559 |
| Cow position: | chr19:32244466-32245002 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 214 |
| Conread position: | 27-570 |
| Cow position: | chr19:76447-75940 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 49 |
| Conread position: | 27-571 |
| Cow position: | chr19:416440-416991 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 25 |
| Conread position: | 27-573 |
| Cow position: | chr19:171997-172543 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 211 |
| Conread position: | 28-307 |
| Cow position: | chr19:1031897-1032179 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 215, 22 |
| Conread position: | 29-556 |
| Cow position: | chr19:7450210-7449710 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 30-548 |
| Cow position: | chr19:40887861-40887350 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 31-241 |
| Cow position: | chr19:378083-377875 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 97 |
| Conread position: | 31-571 |
| Cow position: | chr19:43143507-43144046 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 33-372 |
| Cow position: | chr19:4532949-4532625 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 33-405 |
| Cow position: | chr19:29209359-29209721 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 33-414 |
| Cow position: | chr19:548188-548535 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 227, 24 |
| Conread position: | 33-561 |
| Cow position: | chr19:39688337-39688847 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 24 |
| Conread position: | 33-571 |
| Cow position: | chr19:170948-170417 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 100 |
| Conread position: | 33-571 |
| Cow position: | chr19:28593066-28593593 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 207 |
| Conread position: | 33-571 |
| Cow position: | chr19:32212275-32211743 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 91 |
| Conread position: | 33-571 |
| Cow position: | chr19:32665325-32665855 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 130 |
| Conread position: | 33-574 |
| Cow position: | chr19:32223636-32223115 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 34-459 |
| Cow position: | chr19:55078539-55078963 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 119 |
| Conread position: | 34-465 |
| Cow position: | chr19:34217-34639 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 34-535 |
| Cow position: | chr19:4385278-4385773 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 171 |
| Conread position: | 34-571 |
| Cow position: | chr19:772392-772929 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 34-571 |
| Cow position: | chr19:10672513-10671976 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 204 |
| Conread position: | 34-573 |
| Cow position: | chr19:203755-204293 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 34-573 |
| Cow position: | chr19:439853-439325 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 207 |
| Conread position: | 34-573 |
| Cow position: | chr19:893809-893283 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 15 |
| Conread position: | 34-573 |
| Cow position: | chr19:7488106-7488645 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 208 |
| Conread position: | 34-573 |
| Cow position: | chr19:33941405-33941942 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 205 |
| Conread position: | 34-573 |
| Cow position: | chr19:39390315-39390840 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 57 |
| Conread position: | 34-573 |
| Cow position: | chr19:40852637-40852106 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 204 |
| Conread position: | 35-307 |
| Cow position: | chr19:536675-536934 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 167, 22 |
| Conread position: | 35-404 |
| Cow position: | chr19:20111426-20111075 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 35-479 |
| Cow position: | chr19:359708-359272 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 70 |
| Conread position: | 35-520 |
| Cow position: | chr19:261232-261721 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 50-573 |
| Cow position: | chr19:30754986-30755501 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 192 |
| Conread position: | 78-458 |
| Cow position: | chr19:543790-543410 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 103 |
| Conread position: | 93-573 |
| Cow position: | chr19:42248667-42249135 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 132 |
| Conread position: | 118-573 |
| Cow position: | chr19:33873304-33873758 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 124 |
| Conread position: | 138-555 |
| Cow position: | chr19:350387-349977 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 101 |
| Conread position: | 143-573 |
| Cow position: | chr19:6553515-6553932 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 86 |
| Conread position: | 147-463 |
| Cow position: | chr19:32785702-32785394 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 174-411 |
| Cow position: | chr19:18728790-18729019 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 191-464 |
| Cow position: | chr19:32237730-32237460 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 129, 34 |
| Conread position: | 251-573 |
| Cow position: | chr19:35376801-35377113 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 60 |
| Conread position: | 259-571 |
| Cow position: | chr19:52151816-52151500 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 5 |
| Conread position: | 264-571 |
| Cow position: | chr19:20104732-20105043 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 269-573 |
| Cow position: | chr19:377872-377577 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 133, 55 |
| Conread position: | 270-478 |
| Cow position: | chr19:7405451-7405240 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 285-573 |
| Cow position: | chr19:2274334-2274046 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 292-573 |
| Cow position: | chr19:1032130-1032407 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 327-571 |
| Cow position: | chr19:352909-352661 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 350-573 |
| Cow position: | chr19:42649005-42648782 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 6, 14 |
| Conread position: | 400-571 |
| Cow position: | chr19:28376641-28376816 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.