Cow genome map
| Conread name: | Lng1-LNG010062C07 |
| Conread position: | 3-322 |
| Cow position: | chr20:19192408-19192094 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 21-388 |
| Cow position: | chr20:35973672-35973307 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 28 |
| Conread position: | 21-570 |
| Cow position: | chr20:5560977-5560429 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 10 |
| Conread position: | 24-391 |
| Cow position: | chr20:29572445-29572088 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 104 |
| Conread position: | 27-351 |
| Cow position: | chr20:20755687-20755364 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 27-573 |
| Cow position: | chr20:22206286-22206825 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 149 |
| Conread position: | 28-571 |
| Cow position: | chr20:15098125-15097590 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 26 |
| Conread position: | 33-307 |
| Cow position: | chr20:28593493-28593765 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 33-383 |
| Cow position: | chr20:4799896-4799554 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 91 |
| Conread position: | 33-394 |
| Cow position: | chr20:22717938-22717586 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 266, 56 |
| Conread position: | 33-418 |
| Cow position: | chr20:21393322-21393696 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 93 |
| Conread position: | 33-570 |
| Cow position: | chr20:8313684-8313154 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 91 |
| Conread position: | 33-571 |
| Cow position: | chr20:822500-823054 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 33-571 |
| Cow position: | chr20:3270472-3270991 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 16 |
| Conread position: | 33-571 |
| Cow position: | chr20:5483941-5484477 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 33-571 |
| Cow position: | chr20:19437707-19438227 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 91 |
| Conread position: | 33-573 |
| Cow position: | chr20:13665437-13664927 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 20 |
| Conread position: | 34-573 |
| Cow position: | chr20:5534692-5535226 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 90 |
| Conread position: | 34-573 |
| Cow position: | chr20:7116720-7116180 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 157 |
| Conread position: | 34-573 |
| Cow position: | chr20:12439011-12438472 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 204 |
| Conread position: | 34-573 |
| Cow position: | chr20:13762656-13763193 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 90 |
| Conread position: | 34-573 |
| Cow position: | chr20:21914076-21914616 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 207 |
| Conread position: | 34-573 |
| Cow position: | chr20:23469910-23469377 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 208 |
| Conread position: | 34-573 |
| Cow position: | chr20:23798632-23799174 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 204 |
| Conread position: | 34-573 |
| Cow position: | chr20:25851240-25850702 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 204 |
| Conread position: | 34-573 |
| Cow position: | chr20:28160531-28161059 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 101 |
| Conread position: | 34-573 |
| Cow position: | chr20:28565850-28565307 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 212 |
| Conread position: | 34-573 |
| Cow position: | chr20:30684089-30684609 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 171 |
| Conread position: | 35-384 |
| Cow position: | chr20:10102794-10102461 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 7 |
| Conread position: | 35-571 |
| Cow position: | chr20:15064520-15065052 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 207 |
| Conread position: | 35-573 |
| Cow position: | chr20:27868948-27869486 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 117 |
| Conread position: | 44-570 |
| Cow position: | chr20:3252373-3251849 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 181 |
| Conread position: | 46-562 |
| Cow position: | chr20:9954208-9953708 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 63 |
| Conread position: | 46-583 |
| Cow position: | chr20:31379120-31378589 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 45 |
| Conread position: | 50-477 |
| Cow position: | chr20:11679344-11678918 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 187 |
| Conread position: | 76-573 |
| Cow position: | chr20:35119366-35119858 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 126 |
| Conread position: | 79-302 |
| Cow position: | chr20:24390168-24390385 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 67, 163 |
| Conread position: | 95-426 |
| Cow position: | chr20:18328243-18327929 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 209, 36 |
| Conread position: | 104-571 |
| Cow position: | chr20:29948338-29948786 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 108 |
| Conread position: | 106-460 |
| Cow position: | chr20:24516858-24517206 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 218, 16 |
| Conread position: | 110-569 |
| Cow position: | chr20:8835805-8835353 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 118-573 |
| Cow position: | chr20:8004392-8003937 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 120-573 |
| Cow position: | chr20:15291854-15292299 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 85 |
| Conread position: | 134-571 |
| Cow position: | chr20:28476169-28476580 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 311, 27 |
| Conread position: | 158-571 |
| Cow position: | chr20:15947519-15947093 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 79 |
| Conread position: | 172-571 |
| Cow position: | chr20:25960991-25961390 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 65 |
| Conread position: | 189-571 |
| Cow position: | chr20:13680152-13679771 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 191-571 |
| Cow position: | chr20:3032971-3033348 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 246-545 |
| Cow position: | chr20:10841283-10840986 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 199, 66 |
| Conread position: | 249-565 |
| Cow position: | chr20:3684524-3684207 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 157 |
| Conread position: | 298-558 |
| Cow position: | chr20:8993630-8993372 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 147, 18 |
| Conread position: | 301-573 |
| Cow position: | chr20:13434939-13434666 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 345-538 |
| Cow position: | chr20:19367530-19367336 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 128 |
| Conread position: | 346-573 |
| Cow position: | chr20:10856972-10856748 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 64 |
| Conread position: | 360-569 |
| Cow position: | chr20:35104558-35104345 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 389-571 |
| Cow position: | chr20:10846014-10845835 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 15 |
Show alignments to all cow chromosomes.