Cow genome map
| Conread name: | Lng1-LNG010062C07 |
| Conread position: | 13-573 |
| Cow position: | chr23:15176750-15177306 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 5 |
| Conread position: | 17-274 |
| Cow position: | chr23:2765695-2765449 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 19-335 |
| Cow position: | chr23:31652169-31651884 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 19-445 |
| Cow position: | chr23:16481670-16481268 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 19-571 |
| Cow position: | chr23:4434146-4434689 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 116 |
| Conread position: | 21-570 |
| Cow position: | chr23:31446499-31447047 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 10 |
| Conread position: | 26-334 |
| Cow position: | chr23:2574256-2574555 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 154, 7 |
| Conread position: | 27-345 |
| Cow position: | chr23:22875939-22875628 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 27-571 |
| Cow position: | chr23:2313548-2313007 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 210 |
| Conread position: | 27-571 |
| Cow position: | chr23:19950895-19950350 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 211 |
| Conread position: | 27-571 |
| Cow position: | chr23:20301901-20302445 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 213 |
| Conread position: | 27-573 |
| Cow position: | chr23:19332705-19332174 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 24 |
| Conread position: | 28-571 |
| Cow position: | chr23:16617160-16616613 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 143 |
| Conread position: | 32-573 |
| Cow position: | chr23:36031674-36031138 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 92 |
| Conread position: | 33-542 |
| Cow position: | chr23:3013330-3013850 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 33-561 |
| Cow position: | chr23:5875076-5874559 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 93 |
| Conread position: | 33-571 |
| Cow position: | chr23:988945-988415 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 202 |
| Conread position: | 33-571 |
| Cow position: | chr23:4276654-4277188 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 81 |
| Conread position: | 33-571 |
| Cow position: | chr23:4359525-4360063 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 204 |
| Conread position: | 33-571 |
| Cow position: | chr23:5779390-5778854 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 197 |
| Conread position: | 33-571 |
| Cow position: | chr23:7273356-7273864 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 49 |
| Conread position: | 34-514 |
| Cow position: | chr23:4815771-4816250 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 42 |
| Conread position: | 34-569 |
| Cow position: | chr23:28913109-28913627 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 196 |
| Conread position: | 34-571 |
| Cow position: | chr23:19489237-19489775 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 87 |
| Conread position: | 34-571 |
| Cow position: | chr23:28216987-28217523 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 209 |
| Conread position: | 34-573 |
| Cow position: | chr23:967651-967115 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 210 |
| Conread position: | 34-573 |
| Cow position: | chr23:2795865-2795333 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 171 |
| Conread position: | 34-573 |
| Cow position: | chr23:3881998-3881470 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 89 |
| Conread position: | 34-573 |
| Cow position: | chr23:15220201-15219656 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 285 |
| Conread position: | 34-573 |
| Cow position: | chr23:27399200-27399738 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 204 |
| Conread position: | 34-573 |
| Cow position: | chr23:30636605-30636066 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 204 |
| Conread position: | 35-565 |
| Cow position: | chr23:22147561-22147023 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 35-573 |
| Cow position: | chr23:2027418-2026884 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 89 |
| Conread position: | 35-573 |
| Cow position: | chr23:4640927-4640389 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 152 |
| Conread position: | 35-573 |
| Cow position: | chr23:15525311-15525845 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 89 |
| Conread position: | 38-573 |
| Cow position: | chr23:11778186-11778723 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 153 |
| Conread position: | 46-555 |
| Cow position: | chr23:34174892-34175394 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 79 |
| Conread position: | 46-573 |
| Cow position: | chr23:4751724-4752221 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 494, 6 |
| Conread position: | 49-573 |
| Cow position: | chr23:4888392-4888908 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 193 |
| Conread position: | 50-314 |
| Cow position: | chr23:7750105-7750362 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 50-556 |
| Cow position: | chr23:13508782-13509270 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 331 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 213, 30 |
| Conread position: | 56-476 |
| Cow position: | chr23:2340121-2340532 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 125 |
| Conread position: | 67-571 |
| Cow position: | chr23:2757310-2757827 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 37 |
| Conread position: | 81-561 |
| Cow position: | chr23:2524452-2523974 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 148 |
| Conread position: | 108-569 |
| Cow position: | chr23:14974794-14974332 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 134 |
| Conread position: | 109-573 |
| Cow position: | chr23:20156459-20155980 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 14 |
| Conread position: | 117-573 |
| Cow position: | chr23:14965967-14965517 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 121 |
| Conread position: | 141-573 |
| Cow position: | chr23:38578095-38578510 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 50 |
| Conread position: | 156-538 |
| Cow position: | chr23:6216393-6216769 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 81 |
| Conread position: | 165-571 |
| Cow position: | chr23:25684231-25683831 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 200-571 |
| Cow position: | chr23:31591946-31591569 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 37 |
| Conread position: | 204-571 |
| Cow position: | chr23:29474687-29474330 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 234-477 |
| Cow position: | chr23:3380384-3380140 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 238-571 |
| Cow position: | chr23:1327564-1327241 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 73, 108 |
| Conread position: | 250-549 |
| Cow position: | chr23:10903440-10903747 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 256-573 |
| Cow position: | chr23:2716304-2716623 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 144 |
| Conread position: | 264-570 |
| Cow position: | chr23:36211206-36210889 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 226 |
| Conread position: | 293-571 |
| Cow position: | chr23:31595286-31595003 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 27, 243 |
| Conread position: | 294-571 |
| Cow position: | chr23:2574488-2574768 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 222 |
| Conread position: | 295-465 |
| Cow position: | chr23:31651596-31651434 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 148, 22 |
| Conread position: | 353-573 |
| Cow position: | chr23:16615981-16615764 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 390-542 |
| Cow position: | chr23:22875623-22875473 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 149, 67 |
| Conread position: | 390-571 |
| Cow position: | chr23:2765403-2765220 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 392-561 |
| Cow position: | chr23:2782380-2782213 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 402-571 |
| Cow position: | chr23:29452258-29452085 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.