Cow genome map

Conread name: Lng1-LNG010062C07

Conread position: 2-571
Cow position: chr24:6433992-6434559 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 29

Conread position: 4-468
Cow position: chr24:38635493-38635969 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 76

Conread position: 4-571
Cow position: chr24:16649548-16648998 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 237

Conread position: 5-473
Cow position: chr24:39678189-39678629 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 38

Conread position: 11-411
Cow position: chr24:6645178-6645570 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 20

Conread position: 13-571
Cow position: chr24:36560317-36559768 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 36

Conread position: 17-353
Cow position: chr24:12288961-12288630 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 113

Conread position: 17-561
Cow position: chr24:12797993-12797459 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 26

Conread position: 17-571
Cow position: chr24:12236820-12237373 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 109

Conread position: 19-573
Cow position: chr24:35841847-35841302 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 21-413
Cow position: chr24:2635890-2636276 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 10

Conread position: 21-570
Cow position: chr24:44017316-44017864 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 10

Conread position: 22-470
Cow position: chr24:12224709-12224245 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 24-358
Cow position: chr24:584423-584101 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 161, 26

Conread position: 26-571
Cow position: chr24:8029925-8030470 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 211

Conread position: 27-571
Cow position: chr24:6025321-6024779 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 211

Conread position: 27-571
Cow position: chr24:6083792-6084336 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 210

Conread position: 27-571
Cow position: chr24:9188956-9188413 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 210

Conread position: 27-571
Cow position: chr24:22792952-22793491 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 97

Conread position: 27-571
Cow position: chr24:33739567-33739021 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 49

Conread position: 27-571
Cow position: chr24:36707635-36708165 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 44

Conread position: 27-573
Cow position: chr24:6537337-6537858 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 47

Conread position: 27-573
Cow position: chr24:12485542-12484996 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 210

Conread position: 27-573
Cow position: chr24:32331120-32331636 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 28-431
Cow position: chr24:36296944-36297345 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 271
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 128

Conread position: 28-571
Cow position: chr24:15392527-15392021 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 98

Conread position: 29-571
Cow position: chr24:35838854-35838301 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 215

Conread position: 33-419
Cow position: chr24:7060883-7061265 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 184

Conread position: 33-427
Cow position: chr24:17187327-17187713 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 180

Conread position: 33-445
Cow position: chr24:16140871-16141265 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 275
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 10

Conread position: 33-447
Cow position: chr24:14390940-14390542 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 33-471
Cow position: chr24:12161660-12162094 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 71

Conread position: 33-571
Cow position: chr24:6145141-6145687 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 210

Conread position: 33-571
Cow position: chr24:6335476-6336001 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 41

Conread position: 33-571
Cow position: chr24:13187969-13188492 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 91

Conread position: 33-571
Cow position: chr24:37321818-37321295 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 346
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 129, 49

Conread position: 34-357
Cow position: chr24:13531749-13531433 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 16

Conread position: 34-498
Cow position: chr24:12131699-12131241 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 16

Conread position: 34-569
Cow position: chr24:19833166-19833702 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 90

Conread position: 34-573
Cow position: chr24:12085982-12086519 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 99

Conread position: 34-573
Cow position: chr24:14384829-14384294 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 103

Conread position: 35-570
Cow position: chr24:33933151-33933684 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 117

Conread position: 35-573
Cow position: chr24:1447353-1447875 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 88

Conread position: 45-571
Cow position: chr24:16084867-16084340 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 192

Conread position: 51-573
Cow position: chr24:4415724-4415208 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 113

Conread position: 86-568
Cow position: chr24:14584929-14585393 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 12

Conread position: 104-542
Cow position: chr24:22951988-22952426 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 87

Conread position: 104-573
Cow position: chr24:148763-148298 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 88

Conread position: 106-570
Cow position: chr24:9092419-9091967 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 132

Conread position: 109-573
Cow position: chr24:40548731-40549195 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 117-573
Cow position: chr24:12335927-12335454 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 110

Conread position: 167-562
Cow position: chr24:37216919-37217309 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 76

Conread position: 167-573
Cow position: chr24:40654306-40654705 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 26

Conread position: 168-383
Cow position: chr24:35987428-35987228 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 61

Conread position: 244-573
Cow position: chr24:17696979-17696657 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 295-542
Cow position: chr24:13524145-13524394 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 113

Conread position: 308-573
Cow position: chr24:29187337-29187604 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 319-572
Cow position: chr24:1438118-1437868 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 221, 24

Conread position: 379-571
Cow position: chr24:6645827-6646022 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 404-570
Cow position: chr24:7061539-7061707 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.