Cow genome map
| Conread name: | Lng1-LNG010062C07 |
| Conread position: | 2-571 |
| Cow position: | chr25:18276118-18275553 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 2-573 |
| Cow position: | chr25:17589835-17589277 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 25 |
| Conread position: | 9-568 |
| Cow position: | chr25:26921946-26922489 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 41 |
| Conread position: | 24-570 |
| Cow position: | chr25:18255627-18255098 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 27-454 |
| Cow position: | chr25:33991323-33990902 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 13 |
| Conread position: | 27-554 |
| Cow position: | chr25:18421376-18421928 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 157 |
| Conread position: | 27-569 |
| Cow position: | chr25:18092751-18093283 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 162 |
| Conread position: | 27-571 |
| Cow position: | chr25:20777165-20776627 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 185 |
| Conread position: | 27-571 |
| Cow position: | chr25:35362687-35362154 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 115 |
| Conread position: | 27-573 |
| Cow position: | chr25:12759861-12759323 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 28-569 |
| Cow position: | chr25:36240279-36240822 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 31-414 |
| Cow position: | chr25:17560879-17560489 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 32-419 |
| Cow position: | chr25:26866961-26867363 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 211 |
| Conread position: | 33-565 |
| Cow position: | chr25:14015915-14016434 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 85 |
| Conread position: | 33-569 |
| Cow position: | chr25:19288609-19288073 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 366 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 311, 93 |
| Conread position: | 33-570 |
| Cow position: | chr25:11375608-11375074 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 110 |
| Conread position: | 33-571 |
| Cow position: | chr25:19916821-19917359 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 199 |
| Conread position: | 33-571 |
| Cow position: | chr25:34656707-34656171 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 202 |
| Conread position: | 33-573 |
| Cow position: | chr25:11933784-11933254 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 52 |
| Conread position: | 34-477 |
| Cow position: | chr25:17615525-17615091 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 73, 91 |
| Conread position: | 34-572 |
| Cow position: | chr25:25506389-25506925 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 208 |
| Conread position: | 34-573 |
| Cow position: | chr25:8674654-8675193 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 204 |
| Conread position: | 34-573 |
| Cow position: | chr25:13780775-13781307 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 112 |
| Conread position: | 34-573 |
| Cow position: | chr25:18890276-18889738 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 207 |
| Conread position: | 34-573 |
| Cow position: | chr25:22147234-22147772 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 64 |
| Conread position: | 34-573 |
| Cow position: | chr25:26279005-26279536 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 145 |
| Conread position: | 34-573 |
| Cow position: | chr25:34347252-34346740 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 46 |
| Conread position: | 34-617 |
| Cow position: | chr25:20629316-20629887 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 39-571 |
| Cow position: | chr25:18060842-18060327 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 195 |
| Conread position: | 40-570 |
| Cow position: | chr25:17468947-17468427 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 10 |
| Conread position: | 44-571 |
| Cow position: | chr25:32579715-32580240 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 45-549 |
| Cow position: | chr25:18027880-18027372 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 197 |
| Conread position: | 101-470 |
| Cow position: | chr25:13454986-13454632 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 110-503 |
| Cow position: | chr25:39560463-39560092 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 334, 26 |
| Conread position: | 127-571 |
| Cow position: | chr25:18231591-18232018 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 191, 44 |
| Conread position: | 156-573 |
| Cow position: | chr25:12942840-12942423 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 85 |
| Conread position: | 171-565 |
| Cow position: | chr25:23345464-23345068 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 72 |
| Conread position: | 189-571 |
| Cow position: | chr25:33665976-33665598 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 238-573 |
| Cow position: | chr25:27022628-27022289 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 251-555 |
| Cow position: | chr25:33243793-33244079 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 289, 15 |
| Conread position: | 268-571 |
| Cow position: | chr25:18195130-18194823 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 99 |
| Conread position: | 327-571 |
| Cow position: | chr25:18303430-18303675 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 112, 186 |
| Conread position: | 348-569 |
| Cow position: | chr25:9544115-9544334 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 362-573 |
| Cow position: | chr25:34014422-34014211 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 125 |
Show alignments to all cow chromosomes.