Cow genome map
Conread name: | Lng1-LNG010062C07 |
Conread position: | 1-573 |
Cow position: | chr29:1714927-1715486 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 42 |
Conread position: | 2-479 |
Cow position: | chr29:16109404-16109877 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 200 |
Conread position: | 2-571 |
Cow position: | chr29:35296553-35297117 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 255, 93 |
Conread position: | 4-565 |
Cow position: | chr29:104256-104804 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 105 |
Conread position: | 4-569 |
Cow position: | chr29:30811221-30811763 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 64 |
Conread position: | 4-570 |
Cow position: | chr29:15950506-15949949 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 102 |
Conread position: | 7-571 |
Cow position: | chr29:610931-610369 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 128 |
Conread position: | 27-308 |
Cow position: | chr29:31121508-31121782 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 197 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 27-446 |
Cow position: | chr29:28060966-28060548 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 210 |
Conread position: | 27-479 |
Cow position: | chr29:15969448-15969001 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 134 |
Conread position: | 27-501 |
Cow position: | chr29:13853320-13852853 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 64 |
Conread position: | 27-535 |
Cow position: | chr29:32315740-32316246 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 210 |
Conread position: | 27-571 |
Cow position: | chr29:15895148-15894607 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 97 |
Conread position: | 28-571 |
Cow position: | chr29:27250634-27250099 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 213 |
Conread position: | 31-571 |
Cow position: | chr29:21543672-21543126 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 217 |
Conread position: | 31-573 |
Cow position: | chr29:10824257-10823724 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 216 |
Conread position: | 32-353 |
Cow position: | chr29:34609243-34608934 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 74 |
Conread position: | 32-573 |
Cow position: | chr29:2099549-2100090 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 206 |
Conread position: | 33-419 |
Cow position: | chr29:31180829-31181213 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 204 |
Conread position: | 33-434 |
Cow position: | chr29:16176060-16175666 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 251 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 75, 135 |
Conread position: | 33-568 |
Cow position: | chr29:10848410-10847852 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 154 |
Conread position: | 33-571 |
Cow position: | chr29:2750677-2750178 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 506, 29 |
Conread position: | 33-571 |
Cow position: | chr29:7840501-7841039 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 98 |
Conread position: | 33-571 |
Cow position: | chr29:11048989-11049521 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 92 |
Conread position: | 33-571 |
Cow position: | chr29:16769838-16770366 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 406, 172 |
Conread position: | 33-571 |
Cow position: | chr29:27041054-27040529 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 93 |
Conread position: | 33-571 |
Cow position: | chr29:43366290-43365759 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 24 |
Conread position: | 34-435 |
Cow position: | chr29:21246275-21246675 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 209 |
Conread position: | 34-572 |
Cow position: | chr29:10648538-10648007 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 90 |
Conread position: | 34-573 |
Cow position: | chr29:48769-48235 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 195 |
Conread position: | 34-573 |
Cow position: | chr29:2689612-2690145 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 90 |
Conread position: | 34-573 |
Cow position: | chr29:2841658-2841128 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 90 |
Conread position: | 34-573 |
Cow position: | chr29:6266785-6266256 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 405, 35 |
Conread position: | 34-573 |
Cow position: | chr29:7431509-7430974 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 208 |
Conread position: | 34-573 |
Cow position: | chr29:19623537-19623002 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 90 |
Conread position: | 34-573 |
Cow position: | chr29:19652815-19653353 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 204 |
Conread position: | 34-573 |
Cow position: | chr29:20250866-20251404 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 157 |
Conread position: | 34-573 |
Cow position: | chr29:23975539-23976085 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 213 |
Conread position: | 34-573 |
Cow position: | chr29:25932837-25932299 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 176 |
Conread position: | 34-573 |
Cow position: | chr29:26165115-26164577 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 10 |
Conread position: | 34-573 |
Cow position: | chr29:38226701-38227225 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 70 |
Conread position: | 34-573 |
Cow position: | chr29:39079999-39079467 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 405, 204 |
Conread position: | 34-573 |
Cow position: | chr29:40503272-40502737 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 157 |
Conread position: | 34-573 |
Cow position: | chr29:43322266-43322800 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 207 |
Conread position: | 34-573 |
Cow position: | chr29:45459426-45459961 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 90 |
Conread position: | 34-574 |
Cow position: | chr29:34800099-34799562 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 42 |
Conread position: | 34-589 |
Cow position: | chr29:19893474-19894035 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 364 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 168, 22 |
Conread position: | 35-570 |
Cow position: | chr29:5957311-5957846 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 100 |
Conread position: | 35-573 |
Cow position: | chr29:32539518-32540055 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 208 |
Conread position: | 37-335 |
Cow position: | chr29:32640497-32640784 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 221 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 16, 46 |
Conread position: | 45-571 |
Cow position: | chr29:35196393-35196907 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 83 |
Conread position: | 47-470 |
Cow position: | chr29:4635242-4634835 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 392, 35 |
Conread position: | 67-526 |
Cow position: | chr29:17662661-17663101 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 172 |
Conread position: | 68-573 |
Cow position: | chr29:16022272-16022775 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 60 |
Conread position: | 82-573 |
Cow position: | chr29:11855354-11855847 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 74 |
Conread position: | 87-447 |
Cow position: | chr29:24198860-24198504 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 34 |
Conread position: | 119-571 |
Cow position: | chr29:34925263-34925722 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 159 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 281, 0 |
Conread position: | 124-551 |
Cow position: | chr29:27981123-27980694 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 117 |
Conread position: | 145-571 |
Cow position: | chr29:19884887-19885313 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 92 |
Conread position: | 172-414 |
Cow position: | chr29:5983335-5983096 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 172 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 150, 57 |
Conread position: | 172-573 |
Cow position: | chr29:11841511-11841903 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 19 |
Conread position: | 189-470 |
Cow position: | chr29:13648279-13648544 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 197 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 252, 56 |
Conread position: | 191-573 |
Cow position: | chr29:14585790-14586167 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 197-571 |
Cow position: | chr29:670187-669814 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 40 |
Conread position: | 198-573 |
Cow position: | chr29:45587475-45587115 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 259 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 151, 44 |
Conread position: | 238-571 |
Cow position: | chr29:18857038-18856701 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 240-573 |
Cow position: | chr29:42650193-42650531 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 105 |
Conread position: | 240-573 |
Cow position: | chr29:42802053-42802391 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 105 |
Conread position: | 242-455 |
Cow position: | chr29:6471308-6471514 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 152 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 34, 38 |
Conread position: | 250-570 |
Cow position: | chr29:2466418-2466092 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 223 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 70, 95 |
Conread position: | 253-571 |
Cow position: | chr29:13581995-13582311 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 226 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 67, 8 |
Conread position: | 256-573 |
Cow position: | chr29:9643835-9643511 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 154 |
Conread position: | 269-573 |
Cow position: | chr29:4056087-4056395 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 201 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 39, 47 |
Conread position: | 293-527 |
Cow position: | chr29:12796400-12796167 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 151, 12 |
Conread position: | 314-570 |
Cow position: | chr29:10844229-10844482 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 168 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 10, 22 |
Conread position: | 319-573 |
Cow position: | chr29:410536-410280 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 190 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 30, 24 |
Show alignments to all cow chromosomes.