Cow genome map
Conread name: | Lng1-LNG010062C07 |
Conread position: | 1-571 |
Cow position: | chr4:66925399-66925963 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 96 |
Conread position: | 2-522 |
Cow position: | chr4:528391-528909 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 29 |
Conread position: | 2-570 |
Cow position: | chr4:32211564-32212132 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 235 |
Conread position: | 2-571 |
Cow position: | chr4:3125179-3125761 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 29 |
Conread position: | 4-571 |
Cow position: | chr4:101529-100967 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 351, 27 |
Conread position: | 11-573 |
Cow position: | chr4:18425111-18424557 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 113 |
Conread position: | 21-373 |
Cow position: | chr4:51044473-51044132 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 129 |
Conread position: | 21-570 |
Cow position: | chr4:65224117-65223569 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 10 |
Conread position: | 26-358 |
Cow position: | chr4:25733622-25733960 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 226 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 100, 193 |
Conread position: | 27-221 |
Cow position: | chr4:9311659-9311853 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 27-308 |
Cow position: | chr4:23114754-23114477 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 199 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 210, 0 |
Conread position: | 27-554 |
Cow position: | chr4:39272516-39271988 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 22 |
Conread position: | 27-569 |
Cow position: | chr4:602419-602957 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 97 |
Conread position: | 27-571 |
Cow position: | chr4:1931198-1930658 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 170 |
Conread position: | 27-571 |
Cow position: | chr4:13547450-13547995 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 210 |
Conread position: | 27-571 |
Cow position: | chr4:47764748-47764205 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 210 |
Conread position: | 27-573 |
Cow position: | chr4:40824823-40824285 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 116 |
Conread position: | 28-571 |
Cow position: | chr4:34185434-34184918 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 15 |
Conread position: | 29-508 |
Cow position: | chr4:496513-496056 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 317 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 123, 93 |
Conread position: | 30-305 |
Cow position: | chr4:54190285-54190553 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 195 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 20, 92 |
Conread position: | 31-538 |
Cow position: | chr4:3829920-3830407 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 334 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 50, 22 |
Conread position: | 32-550 |
Cow position: | chr4:4905581-4906091 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 206 |
Conread position: | 33-308 |
Cow position: | chr4:10408206-10408480 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 207 |
Conread position: | 33-553 |
Cow position: | chr4:1464492-1463977 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 94 |
Conread position: | 33-571 |
Cow position: | chr4:5879606-5880131 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 91 |
Conread position: | 33-571 |
Cow position: | chr4:6269200-6268664 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 203 |
Conread position: | 33-571 |
Cow position: | chr4:21338552-21338037 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 46 |
Conread position: | 33-571 |
Cow position: | chr4:28830467-28830995 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 41 |
Conread position: | 33-571 |
Cow position: | chr4:30308024-30307493 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 17 |
Conread position: | 33-571 |
Cow position: | chr4:46663632-46664157 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 94 |
Conread position: | 33-573 |
Cow position: | chr4:6490918-6490397 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 196 |
Conread position: | 34-341 |
Cow position: | chr4:1050191-1049885 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 264, 204 |
Conread position: | 34-464 |
Cow position: | chr4:33493240-33493666 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 10 |
Conread position: | 34-514 |
Cow position: | chr4:29532285-29531807 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 204 |
Conread position: | 34-573 |
Cow position: | chr4:3961024-3961559 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 90 |
Conread position: | 34-573 |
Cow position: | chr4:12241791-12241250 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 205 |
Conread position: | 34-573 |
Cow position: | chr4:13492005-13492543 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 204 |
Conread position: | 34-573 |
Cow position: | chr4:16359321-16359851 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 42 |
Conread position: | 34-573 |
Cow position: | chr4:17926825-17926287 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 118 |
Conread position: | 34-573 |
Cow position: | chr4:18516325-18516864 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 204 |
Conread position: | 34-573 |
Cow position: | chr4:24445770-24445239 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 53 |
Conread position: | 34-573 |
Cow position: | chr4:36895803-36896335 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 10 |
Conread position: | 34-573 |
Cow position: | chr4:41330869-41331406 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 209 |
Conread position: | 34-573 |
Cow position: | chr4:43320207-43319679 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 204 |
Conread position: | 34-573 |
Cow position: | chr4:43880539-43881076 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 15 |
Conread position: | 34-573 |
Cow position: | chr4:44724512-44725051 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 204 |
Conread position: | 34-573 |
Cow position: | chr4:45049866-45049331 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 89 |
Conread position: | 34-573 |
Cow position: | chr4:48025831-48026364 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 155 |
Conread position: | 35-418 |
Cow position: | chr4:31668746-31669121 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 79 |
Conread position: | 35-572 |
Cow position: | chr4:355344-355876 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 89 |
Conread position: | 35-573 |
Cow position: | chr4:8598701-8598191 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 410, 70 |
Conread position: | 36-571 |
Cow position: | chr4:66179554-66179022 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 14 |
Conread position: | 37-573 |
Cow position: | chr4:11393903-11393380 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 66 |
Conread position: | 38-568 |
Cow position: | chr4:9101785-9102300 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 321 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 410, 21 |
Conread position: | 44-573 |
Cow position: | chr4:25600171-25599651 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 24 |
Conread position: | 45-571 |
Cow position: | chr4:16056047-16056567 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 79 |
Conread position: | 50-571 |
Cow position: | chr4:157961-158481 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 102 |
Conread position: | 53-367 |
Cow position: | chr4:11383859-11384164 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 173 |
Conread position: | 57-479 |
Cow position: | chr4:6215100-6214686 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 77 |
Conread position: | 92-573 |
Cow position: | chr4:26887356-26886897 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 99 |
Conread position: | 95-564 |
Cow position: | chr4:47718119-47717650 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 143 |
Conread position: | 102-570 |
Cow position: | chr4:969542-969078 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 308 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 39, 97 |
Conread position: | 103-444 |
Cow position: | chr4:15263484-15263157 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 232 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 84, 17 |
Conread position: | 106-478 |
Cow position: | chr4:24198696-24198342 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 245 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 38, 123 |
Conread position: | 117-565 |
Cow position: | chr4:11618374-11618813 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 14 |
Conread position: | 117-573 |
Cow position: | chr4:57979143-57979595 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 74 |
Conread position: | 118-573 |
Cow position: | chr4:33073584-33073142 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 124 |
Conread position: | 128-556 |
Cow position: | chr4:4175959-4176380 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 290 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 18, 5 |
Conread position: | 131-447 |
Cow position: | chr4:21564676-21564960 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 222 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 133-569 |
Cow position: | chr4:27332970-27333399 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 105 |
Conread position: | 134-545 |
Cow position: | chr4:62565516-62565918 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 282 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 18, 90 |
Conread position: | 185-569 |
Cow position: | chr4:60264985-60264604 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 57 |
Conread position: | 190-573 |
Cow position: | chr4:41119597-41119981 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 47 |
Conread position: | 249-503 |
Cow position: | chr4:60673513-60673759 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 178 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 10, 16 |
Conread position: | 253-511 |
Cow position: | chr4:23493390-23493638 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 194 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 191, 58 |
Conread position: | 272-573 |
Cow position: | chr4:12586961-12587266 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 73 |
Conread position: | 286-571 |
Cow position: | chr4:61256572-61256857 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 207 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 7, 60 |
Conread position: | 319-571 |
Cow position: | chr4:9355059-9354805 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 184 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 346-569 |
Cow position: | chr4:11384697-11384919 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 163 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 31, 161 |
Conread position: | 363-570 |
Cow position: | chr4:9587019-9587228 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 148 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 410-571 |
Cow position: | chr4:4415885-4416048 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 116 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.