Cow genome map

Conread name: Lng1-LNG010062C07

Conread position: 1-553
Cow position:
Alignm length: 560
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 125

Conread position: 1-573
Cow position:
Alignm length: 577
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 25

Conread position: 2-571
Cow position:
Alignm length: 575
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 29

Conread position: 2-571
Cow position:
Alignm length: 577
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 121

Conread position: 2-571
Cow position:
Alignm length: 585
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 133

Conread position: 7-571
Cow position:
Alignm length: 569
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 24

Conread position: 15-573
Cow position:
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 178

Conread position: 17-573
Cow position:
Alignm length: 560
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 17-573
Cow position:
Alignm length: 563
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 16

Conread position: 18-549
Cow position:
Alignm length: 536
Alignm identity: 356
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 22

Conread position: 19-571
Cow position:
Alignm length: 562
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 106

Conread position: 25-573
Cow position:
Alignm length: 554
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 19

Conread position: 25-574
Cow position:
Alignm length: 556
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 216

Conread position: 26-571
Cow position:
Alignm length: 550
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 18

Conread position: 26-571
Cow position:
Alignm length: 551
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 211

Conread position: 27-317
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 195, 0

Conread position: 27-354
Cow position:
Alignm length: 330
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 232, 210

Conread position: 27-526
Cow position:
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 210

Conread position: 27-535
Cow position:
Alignm length: 511
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 23

Conread position: 27-551
Cow position:
Alignm length: 544
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 97

Conread position: 27-571
Cow position:
Alignm length: 550
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 171

Conread position: 27-571
Cow position:
Alignm length: 549
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 210

Conread position: 27-571
Cow position:
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 210

Conread position: 27-571
Cow position:
Alignm length: 554
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 210

Conread position: 27-571
Cow position:
Alignm length: 549
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 208

Conread position: 27-571
Cow position:
Alignm length: 553
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 134

Conread position: 27-571
Cow position:
Alignm length: 550
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 108

Conread position: 27-573
Cow position:
Alignm length: 555
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 167

Conread position: 27-573
Cow position:
Alignm length: 558
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 172

Conread position: 27-573
Cow position:
Alignm length: 554
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 97

Conread position: 28-297
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 28-433
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 107

Conread position: 28-552
Cow position:
Alignm length: 531
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 44

Conread position: 28-571
Cow position:
Alignm length: 548
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 96

Conread position: 28-571
Cow position:
Alignm length: 551
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 110

Conread position: 28-571
Cow position:
Alignm length: 554
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 96

Conread position: 29-571
Cow position:
Alignm length: 549
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 21

Conread position: 29-573
Cow position:
Alignm length: 554
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 56

Conread position: 30-349
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 289, 210

Conread position: 30-471
Cow position:
Alignm length: 445
Alignm identity: 296
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 235, 41

Conread position: 31-295
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 7, 20

Conread position: 31-315
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 22, 13

Conread position: 31-570
Cow position:
Alignm length: 553
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 26

Conread position: 31-573
Cow position:
Alignm length: 552
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 215

Conread position: 32-367
Cow position:
Alignm length: 341
Alignm identity: 231
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 164, 21

Conread position: 33-287
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 204, 0

Conread position: 33-288
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 92

Conread position: 33-309
Cow position:
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 31

Conread position: 33-317
Cow position:
Alignm length: 285
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 33-443
Cow position:
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 65

Conread position: 33-476
Cow position:
Alignm length: 446
Alignm identity: 278
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 50

Conread position: 33-538
Cow position:
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 193

Conread position: 33-553
Cow position:
Alignm length: 541
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 90

Conread position: 33-570
Cow position:
Alignm length: 550
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 17

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 91

Conread position: 34-240
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 34-269
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 204, 0

Conread position: 34-290
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 34-303
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 34-322
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 34-570
Cow position:
Alignm length: 540
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 210

Conread position: 34-571
Cow position:
Alignm length: 540
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 16

Conread position: 34-571
Cow position:
Alignm length: 543
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 204

Conread position: 34-572
Cow position:
Alignm length: 544
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 90

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 204

Conread position: 34-573
Cow position:
Alignm length: 554
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 25

Conread position: 34-573
Cow position:
Alignm length: 543
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 204

Conread position: 34-573
Cow position:
Alignm length: 550
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 178

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 90

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 90

Conread position: 34-573
Cow position:
Alignm length: 562
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 222

Conread position: 34-573
Cow position:
Alignm length: 547
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 10

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 76

Conread position: 34-573
Cow position:
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 204

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 90

Conread position: 34-573
Cow position:
Alignm length: 554
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 80

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 204

Conread position: 34-573
Cow position:
Alignm length: 550
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 209

Conread position: 34-576
Cow position:
Alignm length: 547
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 68

Conread position: 35-357
Cow position:
Alignm length: 326
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 89

Conread position: 35-427
Cow position:
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 49

Conread position: 35-552
Cow position:
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 89

Conread position: 35-568
Cow position:
Alignm length: 537
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 202

Conread position: 35-573
Cow position:
Alignm length: 542
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 203

Conread position: 35-573
Cow position:
Alignm length: 543
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 157

Conread position: 35-573
Cow position:
Alignm length: 543
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 74

Conread position: 35-573
Cow position:
Alignm length: 547
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 203

Conread position: 36-573
Cow position:
Alignm length: 547
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 8

Conread position: 44-422
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 78

Conread position: 44-571
Cow position:
Alignm length: 536
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 81

Conread position: 49-571
Cow position:
Alignm length: 538
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 78

Conread position: 52-572
Cow position:
Alignm length: 536
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 20

Conread position: 58-573
Cow position:
Alignm length: 518
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 69

Conread position: 62-434
Cow position:
Alignm length: 374
Alignm identity: 252
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 288, 64

Conread position: 62-535
Cow position:
Alignm length: 479
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 64

Conread position: 63-413
Cow position:
Alignm length: 351
Alignm identity: 236
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 68-477
Cow position:
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 87

Conread position: 77-435
Cow position:
Alignm length: 368
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 164

Conread position: 84-571
Cow position:
Alignm length: 503
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 166

Conread position: 92-472
Cow position:
Alignm length: 403
Alignm identity: 283
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 225, 26

Conread position: 93-538
Cow position:
Alignm length: 447
Alignm identity: 290
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 351, 12

Conread position: 98-573
Cow position:
Alignm length: 490
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 29

Conread position: 106-569
Cow position:
Alignm length: 469
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 136

Conread position: 109-571
Cow position:
Alignm length: 468
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 128

Conread position: 114-573
Cow position:
Alignm length: 466
Alignm identity: 290
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 20

Conread position: 117-571
Cow position:
Alignm length: 459
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 119

Conread position: 127-570
Cow position:
Alignm length: 446
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 110

Conread position: 165-568
Cow position:
Alignm length: 414
Alignm identity: 271
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 288, 74

Conread position: 169-520
Cow position:
Alignm length: 355
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 180, 43

Conread position: 193-561
Cow position:
Alignm length: 378
Alignm identity: 254
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 88, 133

Conread position: 212-574
Cow position:
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 238-424
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 172

Conread position: 238-571
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 40

Conread position: 238-571
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 93, 60

Conread position: 238-573
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 264-570
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 0

Conread position: 265-478
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 74

Conread position: 269-565
Cow position:
Alignm length: 304
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 16

Conread position: 284-571
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 116

Conread position: 292-573
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 292-573
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 53

Conread position: 300-571
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 65

Conread position: 305-572
Cow position:
Alignm length: 271
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 43

Conread position: 306-571
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 225

Conread position: 318-569
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 92

Conread position: 319-498
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 47

Conread position: 326-520
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 19

Conread position: 376-571
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.