Cow genome map

Conread name: Lng1-LNG010062C07

Conread position: 1-573
Cow position:
Alignm length: 581
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 2-571
Cow position:
Alignm length: 574
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 29

Conread position: 4-347
Cow position:
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 50

Conread position: 8-573
Cow position:
Alignm length: 576
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 54

Conread position: 11-571
Cow position:
Alignm length: 566
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 226

Conread position: 17-571
Cow position:
Alignm length: 565
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 17-571
Cow position:
Alignm length: 559
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 26

Conread position: 19-573
Cow position:
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 116

Conread position: 19-577
Cow position:
Alignm length: 577
Alignm identity: 354
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 191, 108

Conread position: 24-573
Cow position:
Alignm length: 558
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 217

Conread position: 25-568
Cow position:
Alignm length: 552
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 26-514
Cow position:
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 7

Conread position: 26-570
Cow position:
Alignm length: 553
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 160

Conread position: 26-574
Cow position:
Alignm length: 553
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 24

Conread position: 27-269
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 27-386
Cow position:
Alignm length: 360
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 0

Conread position: 27-478
Cow position:
Alignm length: 487
Alignm identity: 329
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 214, 106

Conread position: 27-525
Cow position:
Alignm length: 501
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 123

Conread position: 27-565
Cow position:
Alignm length: 544
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 22

Conread position: 27-570
Cow position:
Alignm length: 548
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 210

Conread position: 27-570
Cow position:
Alignm length: 549
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 22

Conread position: 27-571
Cow position:
Alignm length: 551
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 125

Conread position: 27-571
Cow position:
Alignm length: 548
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 97

Conread position: 27-571
Cow position:
Alignm length: 555
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 28-502
Cow position:
Alignm length: 477
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 113

Conread position: 31-498
Cow position:
Alignm length: 469
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 130

Conread position: 31-538
Cow position:
Alignm length: 511
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 93

Conread position: 33-333
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 286, 17

Conread position: 33-465
Cow position:
Alignm length: 434
Alignm identity: 285
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 414, 15

Conread position: 33-528
Cow position:
Alignm length: 505
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 17

Conread position: 33-556
Cow position:
Alignm length: 526
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 20

Conread position: 33-570
Cow position:
Alignm length: 544
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 17

Conread position: 33-571
Cow position:
Alignm length: 553
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 17

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 202

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 90

Conread position: 33-571
Cow position:
Alignm length: 558
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 69

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 28

Conread position: 33-571
Cow position:
Alignm length: 542
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 128

Conread position: 33-571
Cow position:
Alignm length: 564
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 209

Conread position: 33-571
Cow position:
Alignm length: 543
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 91

Conread position: 33-571
Cow position:
Alignm length: 545
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 204

Conread position: 33-571
Cow position:
Alignm length: 544
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 11

Conread position: 33-573
Cow position:
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 77

Conread position: 33-574
Cow position:
Alignm length: 559
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 93

Conread position: 33-575
Cow position:
Alignm length: 548
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 206

Conread position: 34-240
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 167, 35

Conread position: 34-258
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 118, 0

Conread position: 34-332
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 207

Conread position: 34-332
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 16

Conread position: 34-336
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 204

Conread position: 34-463
Cow position:
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 87

Conread position: 34-535
Cow position:
Alignm length: 507
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 208

Conread position: 34-571
Cow position:
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 91

Conread position: 34-571
Cow position:
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 156

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 31

Conread position: 34-573
Cow position:
Alignm length: 547
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 157

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 209

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 207

Conread position: 34-573
Cow position:
Alignm length: 547
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 205

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 209

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 208

Conread position: 34-573
Cow position:
Alignm length: 544
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 16

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 204

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 207

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 93

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 153

Conread position: 34-573
Cow position:
Alignm length: 545
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 204

Conread position: 34-573
Cow position:
Alignm length: 546
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 202

Conread position: 34-574
Cow position:
Alignm length: 546
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 97

Conread position: 35-335
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 294, 203

Conread position: 35-528
Cow position:
Alignm length: 498
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 203

Conread position: 35-570
Cow position:
Alignm length: 541
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 100

Conread position: 35-570
Cow position:
Alignm length: 544
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 35-573
Cow position:
Alignm length: 544
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 89

Conread position: 35-573
Cow position:
Alignm length: 545
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 204

Conread position: 35-573
Cow position:
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 56

Conread position: 35-573
Cow position:
Alignm length: 547
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 9

Conread position: 35-575
Cow position:
Alignm length: 551
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 15

Conread position: 36-553
Cow position:
Alignm length: 524
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 202

Conread position: 37-481
Cow position:
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 64

Conread position: 52-574
Cow position:
Alignm length: 526
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 135

Conread position: 54-438
Cow position:
Alignm length: 391
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 13

Conread position: 67-571
Cow position:
Alignm length: 511
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 167

Conread position: 71-573
Cow position:
Alignm length: 508
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 85

Conread position: 88-571
Cow position:
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 7

Conread position: 117-573
Cow position:
Alignm length: 464
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 18

Conread position: 124-571
Cow position:
Alignm length: 461
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 41

Conread position: 126-339
Cow position:
Alignm length: 217
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 134, 26

Conread position: 127-571
Cow position:
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 71

Conread position: 127-573
Cow position:
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 64

Conread position: 135-573
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 107

Conread position: 146-413
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 173, 91

Conread position: 146-573
Cow position:
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 85

Conread position: 149-571
Cow position:
Alignm length: 426
Alignm identity: 289
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 254, 59

Conread position: 152-562
Cow position:
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 85

Conread position: 153-571
Cow position:
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 84

Conread position: 158-513
Cow position:
Alignm length: 359
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 77

Conread position: 183-573
Cow position:
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 46

Conread position: 238-433
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 27

Conread position: 238-571
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 238-573
Cow position:
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 130

Conread position: 251-562
Cow position:
Alignm length: 315
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 27

Conread position: 264-574
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 81

Conread position: 267-573
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 78

Conread position: 268-571
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 52, 206

Conread position: 281-571
Cow position:
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 285-573
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 271

Conread position: 293-573
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 143, 19

Conread position: 299-537
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 44

Conread position: 321-571
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 22

Conread position: 327-573
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 16

Conread position: 377-573
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 124

Conread position: 386-571
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 88

Conread position: 390-571
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 436-571
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 436-573
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.