Cow genome map

Conread name: Lng1-LNG010064H09

Conread position: 54-462
Cow position: chr16:52274910-52275330 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 296
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 59, 114

Conread position: 55-530
Cow position: chr16:23681587-23681105 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 328
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 9

Conread position: 59-396
Cow position: chr16:10505032-10504699 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 241, 12

Conread position: 60-536
Cow position: chr16:29608742-29608245 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 32

Conread position: 64-478
Cow position: chr16:31117405-31117836 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 13

Conread position: 71-335
Cow position: chr16:53451912-53451647 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 7

Conread position: 71-564
Cow position: chr16:27701051-27701547 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 100

Conread position: 72-327
Cow position: chr16:15945045-15945302 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 100

Conread position: 73-546
Cow position: chr16:47820779-47820288 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 5

Conread position: 73-690
Cow position: chr16:53813442-53814085 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 142

Conread position: 74-298
Cow position: chr16:12324659-12324435 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 92

Conread position: 74-741
Cow position: chr16:54579370-54578697 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 91

Conread position: 75-485
Cow position: chr16:47643641-47643196 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 355

Conread position: 75-723
Cow position: chr16:820455-819803 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 84

Conread position: 77-307
Cow position: chr16:1582727-1582955 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 77-448
Cow position: chr16:44147227-44147615 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 256
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 114

Conread position: 77-453
Cow position: chr16:424604-425006 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 139

Conread position: 77-453
Cow position: chr16:3821732-3821342 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 47

Conread position: 77-482
Cow position: chr16:32781574-32781142 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 36, 169

Conread position: 77-513
Cow position: chr16:11806866-11806432 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 307
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 30, 18

Conread position: 77-603
Cow position: chr16:28192255-28191729 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 80

Conread position: 77-740
Cow position: chr16:18353752-18354424 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 208

Conread position: 78-255
Cow position: chr16:21442408-21442588 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 19

Conread position: 78-264
Cow position: chr16:33290588-33290398 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 161

Conread position: 78-272
Cow position: chr16:15714313-15714115 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 130

Conread position: 78-290
Cow position: chr16:14376984-14376770 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 163

Conread position: 78-299
Cow position: chr16:31575348-31575123 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 136

Conread position: 78-312
Cow position: chr16:22738978-22739209 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 102

Conread position: 78-314
Cow position: chr16:45294746-45294509 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 21

Conread position: 78-318
Cow position: chr16:40446469-40446222 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 165

Conread position: 78-327
Cow position: chr16:20824679-20824428 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 95

Conread position: 78-337
Cow position: chr16:44138289-44138555 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 135

Conread position: 78-371
Cow position: chr16:45122244-45121930 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 78-382
Cow position: chr16:43125747-43126066 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 136

Conread position: 78-388
Cow position: chr16:11083197-11082883 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 87

Conread position: 78-391
Cow position: chr16:23955630-23955955 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 67, 32

Conread position: 78-415
Cow position: chr16:42398688-42399052 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 137

Conread position: 78-419
Cow position: chr16:12320424-12320065 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 78-420
Cow position: chr16:29712617-29712262 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 83

Conread position: 78-454
Cow position: chr16:46433123-46433515 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 93

Conread position: 78-458
Cow position: chr16:24855735-24855344 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 36, 66

Conread position: 78-460
Cow position: chr16:11957378-11957782 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 13

Conread position: 78-461
Cow position: chr16:16552767-16552363 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 35, 137

Conread position: 78-474
Cow position: chr16:9985201-9985602 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 35

Conread position: 78-486
Cow position: chr16:42444364-42443930 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 103

Conread position: 78-495
Cow position: chr16:8322795-8323219 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 286
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 161, 20

Conread position: 78-501
Cow position: chr16:25839813-25839380 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 63

Conread position: 78-510
Cow position: chr16:23058232-23058683 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 297
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 68

Conread position: 78-519
Cow position: chr16:26649432-26649889 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 34

Conread position: 78-519
Cow position: chr16:50872983-50873430 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 73

Conread position: 78-522
Cow position: chr16:14242571-14242116 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 97

Conread position: 78-522
Cow position: chr16:48385216-48385660 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 303
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 30

Conread position: 78-528
Cow position: chr16:17746045-17745569 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 141

Conread position: 78-531
Cow position: chr16:8958857-8959331 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 320
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 115, 32

Conread position: 78-531
Cow position: chr16:29096119-29095686 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 300
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 68

Conread position: 78-550
Cow position: chr16:13689864-13689376 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 82

Conread position: 78-589
Cow position: chr16:48957001-48956479 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 94

Conread position: 78-600
Cow position: chr16:11774849-11775385 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 65

Conread position: 78-605
Cow position: chr16:53428455-53427914 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 77

Conread position: 78-671
Cow position: chr16:24142751-24143363 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 166

Conread position: 78-684
Cow position: chr16:13306670-13307288 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 123

Conread position: 78-710
Cow position: chr16:9933362-9932715 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 87

Conread position: 78-718
Cow position: chr16:50417510-50418145 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 84

Conread position: 78-724
Cow position: chr16:56232014-56231358 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 83

Conread position: 78-736
Cow position: chr16:39473957-39474612 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 86

Conread position: 78-736
Cow position: chr16:42092176-42092849 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 93

Conread position: 78-737
Cow position: chr16:55683499-55682819 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 221

Conread position: 78-740
Cow position: chr16:935256-935925 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 132

Conread position: 78-740
Cow position: chr16:17143142-17142448 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 163

Conread position: 78-740
Cow position: chr16:49229573-49230256 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 39

Conread position: 78-754
Cow position: chr16:18757633-18758331 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 79-300
Cow position: chr16:11134785-11135003 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 93

Conread position: 79-327
Cow position: chr16:31149575-31149334 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 87

Conread position: 79-342
Cow position: chr16:30305617-30305886 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 105, 84

Conread position: 79-343
Cow position: chr16:9553249-9552988 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 221, 32

Conread position: 79-370
Cow position: chr16:7136146-7136437 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 188
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 95

Conread position: 79-399
Cow position: chr16:9905296-9904956 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 318

Conread position: 79-417
Cow position: chr16:48613274-48613605 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 15, 87

Conread position: 79-419
Cow position: chr16:33198233-33198591 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 31

Conread position: 79-426
Cow position: chr16:3304236-3303868 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 56

Conread position: 79-467
Cow position: chr16:45554634-45554233 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 178, 34

Conread position: 79-490
Cow position: chr16:43308365-43308796 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 35

Conread position: 79-499
Cow position: chr16:11422515-11422075 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 34, 108

Conread position: 79-502
Cow position: chr16:56082162-56082599 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 292
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 137

Conread position: 79-510
Cow position: chr16:38905024-38905473 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 303
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 32, 351

Conread position: 79-527
Cow position: chr16:50282235-50282695 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 285
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 168, 31

Conread position: 79-557
Cow position: chr16:46655482-46654990 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 328
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 93

Conread position: 79-580
Cow position: chr16:1548681-1549192 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 82

Conread position: 79-637
Cow position: chr16:52834701-52835246 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 79-646
Cow position: chr16:9973282-9973877 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 249

Conread position: 79-713
Cow position: chr16:49125321-49125971 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 168

Conread position: 79-737
Cow position: chr16:23564338-23563661 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 199

Conread position: 79-740
Cow position: chr16:29159313-29158653 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 34

Conread position: 79-740
Cow position: chr16:45731205-45731849 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 32

Conread position: 79-740
Cow position: chr16:52170253-52169601 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 66

Conread position: 80-247
Cow position: chr16:41696206-41696039 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 86

Conread position: 80-531
Cow position: chr16:8366627-8367093 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 162

Conread position: 80-623
Cow position: chr16:14754130-14754690 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 11

Conread position: 80-649
Cow position: chr16:4856900-4857473 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 138

Conread position: 80-736
Cow position: chr16:33705001-33704331 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 66

Conread position: 80-740
Cow position: chr16:19644085-19643422 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 54

Conread position: 80-740
Cow position: chr16:46552993-46552327 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 69

Conread position: 80-753
Cow position: chr16:13990165-13989494 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 33

Conread position: 81-737
Cow position: chr16:51501126-51500458 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 97

Conread position: 81-740
Cow position: chr16:22804407-22805042 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 41

Conread position: 83-303
Cow position: chr16:12010294-12010069 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 85-402
Cow position: chr16:54225325-54225646 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 8

Conread position: 86-279
Cow position: chr16:16025637-16025435 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 86-478
Cow position: chr16:10148460-10148065 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 285
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 27, 69

Conread position: 86-543
Cow position: chr16:14106837-14106366 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 118

Conread position: 86-544
Cow position: chr16:29380450-29379973 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 131

Conread position: 86-734
Cow position: chr16:4910329-4911005 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 423

Conread position: 87-290
Cow position: chr16:35297594-35297394 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 116

Conread position: 87-300
Cow position: chr16:32893811-32893606 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 55

Conread position: 87-313
Cow position: chr16:17460369-17460132 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 87-399
Cow position: chr16:50933702-50934007 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 206
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 128, 57

Conread position: 87-420
Cow position: chr16:8239672-8240023 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 23

Conread position: 87-442
Cow position: chr16:3047150-3047521 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 76

Conread position: 87-442
Cow position: chr16:4275550-4275921 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 76

Conread position: 87-452
Cow position: chr16:41530116-41530481 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 58

Conread position: 87-463
Cow position: chr16:45678169-45677774 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 84

Conread position: 87-477
Cow position: chr16:7582908-7582497 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 269
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 12

Conread position: 87-615
Cow position: chr16:48095577-48096115 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 87-740
Cow position: chr16:238458-237767 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 87-740
Cow position: chr16:15824249-15824917 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 115

Conread position: 87-740
Cow position: chr16:41752389-41753060 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 91

Conread position: 88-327
Cow position: chr16:51795413-51795655 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 96

Conread position: 88-380
Cow position: chr16:34753762-34754078 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 155

Conread position: 89-424
Cow position: chr16:25387159-25386819 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 24

Conread position: 90-289
Cow position: chr16:31484477-31484673 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 56

Conread position: 90-300
Cow position: chr16:46548073-46548291 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 122

Conread position: 90-302
Cow position: chr16:24895479-24895262 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 83

Conread position: 90-314
Cow position: chr16:30936052-30935825 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 88

Conread position: 90-361
Cow position: chr16:21370001-21370267 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 21

Conread position: 90-371
Cow position: chr16:19052822-19052527 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 34

Conread position: 90-408
Cow position: chr16:7583587-7583251 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 86

Conread position: 90-430
Cow position: chr16:7418562-7418216 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 25

Conread position: 90-438
Cow position: chr16:591615-591987 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 128

Conread position: 90-463
Cow position: chr16:33753624-33753228 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 262
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 125

Conread position: 90-471
Cow position: chr16:11866108-11866495 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 266
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 107

Conread position: 90-472
Cow position: chr16:8065696-8066091 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 23, 124

Conread position: 90-482
Cow position: chr16:15504343-15504746 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 73

Conread position: 90-482
Cow position: chr16:52636206-52636602 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 122, 20

Conread position: 90-497
Cow position: chr16:39695291-39695711 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 291
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 25, 123

Conread position: 90-498
Cow position: chr16:33588850-33588433 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 273
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 123

Conread position: 90-501
Cow position: chr16:12085620-12086020 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 52

Conread position: 90-521
Cow position: chr16:35195422-35195868 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 100

Conread position: 90-525
Cow position: chr16:24023090-24023561 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 309
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 274

Conread position: 90-530
Cow position: chr16:37117265-37116807 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 318
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 82

Conread position: 90-554
Cow position: chr16:23483470-23482997 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 20

Conread position: 90-606
Cow position: chr16:38663519-38664052 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 128

Conread position: 90-616
Cow position: chr16:35758390-35757863 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 90-622
Cow position: chr16:32587397-32586842 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 124

Conread position: 90-629
Cow position: chr16:44743941-44744516 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 123

Conread position: 90-726
Cow position: chr16:30290500-30289854 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 123

Conread position: 90-736
Cow position: chr16:4971832-4972500 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 75

Conread position: 90-740
Cow position: chr16:5654690-5654037 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 122

Conread position: 90-740
Cow position: chr16:18206144-18205482 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 70

Conread position: 90-740
Cow position: chr16:50906667-50905987 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 90-740
Cow position: chr16:54298657-54298008 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 20

Conread position: 90-740
Cow position: chr16:55042377-55043032 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 93-255
Cow position: chr16:51143985-51143822 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 73

Conread position: 93-273
Cow position: chr16:19478582-19478760 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 93-284
Cow position: chr16:34204879-34205070 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 73

Conread position: 93-299
Cow position: chr16:7812879-7812669 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 121

Conread position: 93-307
Cow position: chr16:9959015-9958800 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 77

Conread position: 93-314
Cow position: chr16:51610639-51610868 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 121

Conread position: 93-392
Cow position: chr16:8738253-8737935 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 93-438
Cow position: chr16:30910805-30910444 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 98

Conread position: 93-443
Cow position: chr16:31348576-31348947 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 62, 18

Conread position: 93-489
Cow position: chr16:14125307-14124930 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 67

Conread position: 93-502
Cow position: chr16:4135045-4134627 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 286
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 34

Conread position: 93-511
Cow position: chr16:29557438-29557879 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 93-594
Cow position: chr16:53553530-53554044 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 98

Conread position: 93-596
Cow position: chr16:33646201-33645686 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 71

Conread position: 93-641
Cow position: chr16:8841083-8840513 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 84

Conread position: 93-668
Cow position: chr16:7702701-7702122 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 20

Conread position: 93-698
Cow position: chr16:2396507-2395899 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 218

Conread position: 93-700
Cow position: chr16:42340363-42339763 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 20

Conread position: 93-749
Cow position: chr16:51598427-51599089 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 58

Conread position: 94-394
Cow position: chr16:48146469-48146789 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 94-478
Cow position: chr16:45676689-45677068 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 16

Conread position: 94-582
Cow position: chr16:13611253-13611773 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 157

Conread position: 94-661
Cow position: chr16:7665825-7665229 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 113

Conread position: 95-333
Cow position: chr16:21381388-21381623 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 61

Conread position: 95-482
Cow position: chr16:50289333-50288937 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 272
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 199, 94

Conread position: 95-603
Cow position: chr16:23729734-23730277 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 75

Conread position: 95-737
Cow position: chr16:4059545-4058890 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 16

Conread position: 95-740
Cow position: chr16:25170577-25169916 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 95-740
Cow position: chr16:25484503-25483884 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 442
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 245, 15

Conread position: 95-747
Cow position: chr16:2223210-2223890 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 119

Conread position: 96-430
Cow position: chr16:56590690-56590343 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 38

Conread position: 96-751
Cow position: chr16:3289194-3288543 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 97-510
Cow position: chr16:9729380-9728957 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 286
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 119

Conread position: 97-546
Cow position: chr16:3614919-3614465 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 300
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 32

Conread position: 97-740
Cow position: chr16:31978004-31978667 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 98-273
Cow position: chr16:39385670-39385496 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 72

Conread position: 98-314
Cow position: chr16:27534276-27534062 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 12

Conread position: 98-327
Cow position: chr16:2417405-2417645 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 77

Conread position: 98-327
Cow position: chr16:32536821-32536588 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 39

Conread position: 98-333
Cow position: chr16:42864554-42864787 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 92

Conread position: 98-399
Cow position: chr16:19047252-19047575 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 65, 113

Conread position: 98-430
Cow position: chr16:38191658-38191304 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 15, 52

Conread position: 98-431
Cow position: chr16:6887267-6887614 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 96

Conread position: 98-606
Cow position: chr16:21451031-21450510 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 115

Conread position: 98-632
Cow position: chr16:33299578-33299024 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 93

Conread position: 98-679
Cow position: chr16:26610823-26610212 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 105

Conread position: 98-736
Cow position: chr16:45139845-45139199 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 78

Conread position: 98-740
Cow position: chr16:42969740-42970409 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 117

Conread position: 98-740
Cow position: chr16:46752089-46752758 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 53

Conread position: 99-546
Cow position: chr16:34168768-34168312 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 113

Conread position: 105-737
Cow position: chr16:51112708-51113346 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 72

Conread position: 108-694
Cow position: chr16:7505248-7504674 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 24

Conread position: 109-399
Cow position: chr16:41578394-41578089 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 182, 46

Conread position: 109-414
Cow position: chr16:47964653-47964967 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 40

Conread position: 110-512
Cow position: chr16:11615076-11615477 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 224

Conread position: 111-740
Cow position: chr16:33226372-33227009 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 120

Conread position: 113-429
Cow position: chr16:31269307-31268974 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 98

Conread position: 115-530
Cow position: chr16:48006332-48006757 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 286
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 184, 61

Conread position: 122-737
Cow position: chr16:675646-675026 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 125-446
Cow position: chr16:17282811-17282483 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 23, 15

Conread position: 125-740
Cow position: chr16:601100-600464 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 86

Conread position: 132-497
Cow position: chr16:594077-594465 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 56

Conread position: 136-482
Cow position: chr16:48190871-48191221 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 165, 71

Conread position: 136-526
Cow position: chr16:8933286-8933682 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 268
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 164, 99

Conread position: 138-489
Cow position: chr16:28694867-28694514 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 29

Conread position: 143-460
Cow position: chr16:41696957-41697289 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 157, 167

Conread position: 144-502
Cow position: chr16:46353464-46353813 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 22

Conread position: 144-526
Cow position: chr16:33054347-33054727 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 248
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 202, 163

Conread position: 144-557
Cow position: chr16:53086206-53086617 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 284
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 10, 125

Conread position: 145-740
Cow position: chr16:39394700-39394108 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 10

Conread position: 146-641
Cow position: chr16:24826205-24825688 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 283

Conread position: 148-422
Cow position: chr16:17945651-17945362 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 144, 241

Conread position: 148-570
Cow position: chr16:19003404-19003825 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 20

Conread position: 148-710
Cow position: chr16:7499180-7498621 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 111

Conread position: 148-735
Cow position: chr16:48340563-48341151 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 249

Conread position: 149-364
Cow position: chr16:21040157-21039926 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 15

Conread position: 149-650
Cow position: chr16:12634012-12633522 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 19

Conread position: 149-740
Cow position: chr16:40562360-40561747 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 29

Conread position: 150-501
Cow position: chr16:33235036-33235373 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 88

Conread position: 151-528
Cow position: chr16:5257123-5256738 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 322

Conread position: 154-449
Cow position: chr16:17289072-17288754 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 154-565
Cow position: chr16:48494432-48494856 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 295
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 146, 22

Conread position: 164-740
Cow position: chr16:37669623-37670224 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 264

Conread position: 170-387
Cow position: chr16:39401908-39402123 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 143, 32

Conread position: 190-660
Cow position: chr16:7077655-7078123 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 322
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 19

Conread position: 202-736
Cow position: chr16:22919542-22919022 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 7

Conread position: 207-627
Cow position: chr16:52790125-52789701 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 11

Conread position: 208-502
Cow position: chr16:46175982-46176278 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 120, 94

Conread position: 208-503
Cow position: chr16:53048622-53048311 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 89, 293

Conread position: 208-740
Cow position: chr16:11102751-11103323 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 244

Conread position: 209-605
Cow position: chr16:4626322-4626737 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 295

Conread position: 209-733
Cow position: chr16:23871581-23872122 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 147

Conread position: 210-736
Cow position: chr16:56853998-56853490 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 73

Conread position: 211-430
Cow position: chr16:52133450-52133683 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 211-464
Cow position: chr16:56787709-56787980 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 211-474
Cow position: chr16:12060483-12060201 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 211-505
Cow position: chr16:11008412-11008101 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 32, 23

Conread position: 211-510
Cow position: chr16:689442-689134 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 89, 135

Conread position: 211-518
Cow position: chr16:13752065-13752378 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 89

Conread position: 211-528
Cow position: chr16:18402754-18402431 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 215

Conread position: 211-531
Cow position: chr16:8315126-8315441 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 23

Conread position: 211-603
Cow position: chr16:16548680-16548267 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 95, 212

Conread position: 211-740
Cow position: chr16:11105621-11105076 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 345

Conread position: 211-740
Cow position: chr16:39646612-39646081 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 210

Conread position: 211-740
Cow position: chr16:42217623-42218172 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 288

Conread position: 212-518
Cow position: chr16:19408462-19408768 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 81

Conread position: 212-599
Cow position: chr16:11791076-11790664 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 24

Conread position: 213-502
Cow position: chr16:36203553-36203854 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 141

Conread position: 213-531
Cow position: chr16:53891721-53892048 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 65

Conread position: 213-576
Cow position: chr16:44437-44074 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 21

Conread position: 213-648
Cow position: chr16:47097943-47098369 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 295
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 21

Conread position: 213-740
Cow position: chr16:4698923-4699433 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 203

Conread position: 217-692
Cow position: chr16:29822875-29823364 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 59

Conread position: 219-462
Cow position: chr16:39238005-39237743 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 148

Conread position: 219-731
Cow position: chr16:11568064-11568579 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 25

Conread position: 220-478
Cow position: chr16:51556272-51556520 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 17

Conread position: 227-430
Cow position: chr16:49404108-49404319 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 7

Conread position: 228-688
Cow position: chr16:16424562-16425032 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 32

Conread position: 260-540
Cow position: chr16:39417102-39417384 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 237

Conread position: 261-503
Cow position: chr16:8325450-8325690 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 42

Conread position: 263-628
Cow position: chr16:44973509-44973123 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 209

Conread position: 263-664
Cow position: chr16:33508068-33507663 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 271-589
Cow position: chr16:15808975-15808645 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 39

Conread position: 293-555
Cow position: chr16:43505824-43506093 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 10

Conread position: 333-500
Cow position: chr16:30037061-30037230 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 147

Conread position: 338-482
Cow position: chr16:20633954-20634098 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 338-740
Cow position: chr16:26501081-26500683 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 59

Conread position: 339-524
Cow position: chr16:35623318-35623511 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 339-537
Cow position: chr16:25287764-25287964 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 148

Conread position: 339-694
Cow position: chr16:43275945-43275584 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 144

Conread position: 339-740
Cow position: chr16:14028703-14029103 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 69

Conread position: 341-464
Cow position: chr16:7928515-7928390 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 341-740
Cow position: chr16:8481166-8481561 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 149

Conread position: 344-586
Cow position: chr16:589998-590227 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 344-657
Cow position: chr16:4103240-4103555 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 172, 118

Show alignments to all cow chromosomes.