• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Lng1-LNG010064H09
        

               
Conread position:
               
52-510
               

               
Cow position:
               
chr18:20126936-20127381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
243, 8
               

               
Conread position:
               
57-606
               

               
Cow position:
               
chr18:6310272-6309718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
58-547
               

               
Cow position:
               
chr18:3132585-3133058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
72-740
               

               
Cow position:
               
chr18:31672345-31673019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
73-743
               

               
Cow position:
               
chr18:43283584-43284266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
74-472
               

               
Cow position:
               
chr18:17390819-17391216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
74-521
               

               
Cow position:
               
chr18:38985862-38985397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
74-736
               

               
Cow position:
               
chr18:45903725-45904404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 164
               

               
Conread position:
               
74-737
               

               
Cow position:
               
chr18:22568897-22569535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
75-528
               

               
Cow position:
               
chr18:10905018-10904549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
75-718
               

               
Cow position:
               
chr18:3180580-3179931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
75-740
               

               
Cow position:
               
chr18:9366094-9365379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 436
               

               
Conread position:
               
77-299
               

               
Cow position:
               
chr18:25598061-25598293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
77-463
               

               
Cow position:
               
chr18:33896246-33896656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
77-502
               

               
Cow position:
               
chr18:46048924-46048490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 231
               

               
Conread position:
               
77-510
               

               
Cow position:
               
chr18:5578466-5578025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
77-522
               

               
Cow position:
               
chr18:46452713-46453170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
77-629
               

               
Cow position:
               
chr18:55505571-55505005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
77-737
               

               
Cow position:
               
chr18:13172362-13173034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
78-248
               

               
Cow position:
               
chr18:49441010-49440837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
78-254
               

               
Cow position:
               
chr18:50004539-50004712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
78-272
               

               
Cow position:
               
chr18:49602874-49603071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
78-273
               

               
Cow position:
               
chr18:48407900-48407710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
78-274
               

               
Cow position:
               
chr18:34444569-34444763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
78-296
               

               
Cow position:
               
chr18:44917922-44917705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
78-300
               

               
Cow position:
               
chr18:47824607-47824824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
78-301
               

               
Cow position:
               
chr18:45558310-45558090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
78-313
               

               
Cow position:
               
chr18:38937987-38937755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
78-314
               

               
Cow position:
               
chr18:32251996-32252237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
78-314
               

               
Cow position:
               
chr18:37189123-37189364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
78-327
               

               
Cow position:
               
chr18:3085337-3085603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 226
               

               
Conread position:
               
78-334
               

               
Cow position:
               
chr18:56155683-56155430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr18:50959656-50959381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 167
               

               
Conread position:
               
78-357
               

               
Cow position:
               
chr18:23630448-23630727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
78-391
               

               
Cow position:
               
chr18:11578224-11577927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
78-392
               

               
Cow position:
               
chr18:19641141-19640817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 135
               

               
Conread position:
               
78-399
               

               
Cow position:
               
chr18:8170923-8171254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
78-399
               

               
Cow position:
               
chr18:10891678-10891345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
78-409
               

               
Cow position:
               
chr18:43555346-43555704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
78-429
               

               
Cow position:
               
chr18:30341014-30341375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 182
               

               
Conread position:
               
78-460
               

               
Cow position:
               
chr18:42431444-42431835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
78-463
               

               
Cow position:
               
chr18:10977046-10977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
78-503
               

               
Cow position:
               
chr18:15613693-15614120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
78-512
               

               
Cow position:
               
chr18:11691239-11691691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
78-550
               

               
Cow position:
               
chr18:4884352-4884834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
78-618
               

               
Cow position:
               
chr18:29372037-29371478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 390
               

               
Conread position:
               
78-711
               

               
Cow position:
               
chr18:12242444-12241791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
78-733
               

               
Cow position:
               
chr18:20641334-20641982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
78-734
               

               
Cow position:
               
chr18:3417335-3416670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 161
               

               
Conread position:
               
78-735
               

               
Cow position:
               
chr18:22789923-22790573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
78-736
               

               
Cow position:
               
chr18:1144025-1144720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
78-736
               

               
Cow position:
               
chr18:55120035-55119363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
78-739
               

               
Cow position:
               
chr18:9974162-9974835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
78-740
               

               
Cow position:
               
chr18:7956316-7955637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
78-740
               

               
Cow position:
               
chr18:11867507-11866838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
78-740
               

               
Cow position:
               
chr18:16227728-16227056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
78-740
               

               
Cow position:
               
chr18:50637325-50637973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
78-748
               

               
Cow position:
               
chr18:31082174-31082854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
79-240
               

               
Cow position:
               
chr18:4485762-4485604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
79-306
               

               
Cow position:
               
chr18:32189351-32189569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
79-312
               

               
Cow position:
               
chr18:51383232-51383462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
79-321
               

               
Cow position:
               
chr18:49038620-49038387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
79-430
               

               
Cow position:
               
chr18:1954414-1954790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
79-463
               

               
Cow position:
               
chr18:42479414-42479825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
79-532
               

               
Cow position:
               
chr18:39875079-39875561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 139
               

               
Conread position:
               
79-586
               

               
Cow position:
               
chr18:18592630-18592099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
79-737
               

               
Cow position:
               
chr18:7952379-7951707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 191
               

               
Conread position:
               
79-740
               

               
Cow position:
               
chr18:9089857-9089201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 36
               

               
Conread position:
               
79-740
               

               
Cow position:
               
chr18:44262789-44262104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
80-273
               

               
Cow position:
               
chr18:11434917-11434724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr18:2773222-2773448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr18:2776725-2776951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
80-307
               

               
Cow position:
               
chr18:52649174-52649410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
80-602
               

               
Cow position:
               
chr18:10576268-10575740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
80-740
               

               
Cow position:
               
chr18:40759386-40758701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 309
               

               
Conread position:
               
81-311
               

               
Cow position:
               
chr18:49841448-49841218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
82-474
               

               
Cow position:
               
chr18:37381928-37382342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
86-285
               

               
Cow position:
               
chr18:11672212-11672002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr18:35534991-35535203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr18:14225546-14225349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
87-291
               

               
Cow position:
               
chr18:50632287-50632489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
87-313
               

               
Cow position:
               
chr18:47547824-47548056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
87-313
               

               
Cow position:
               
chr18:49015274-49015058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
87-337
               

               
Cow position:
               
chr18:43796801-43797054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr18:35367047-35367291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
87-399
               

               
Cow position:
               
chr18:48633935-48633623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
87-438
               

               
Cow position:
               
chr18:3193867-3193496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
87-477
               

               
Cow position:
               
chr18:48713700-48713306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
87-499
               

               
Cow position:
               
chr18:42431934-42432359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
87-654
               

               
Cow position:
               
chr18:6881200-6881754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 89
               

               
Conread position:
               
87-740
               

               
Cow position:
               
chr18:11791076-11790433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 77
               

               
Conread position:
               
87-740
               

               
Cow position:
               
chr18:47183155-47183801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 51
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr18:22516379-22516590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
88-435
               

               
Cow position:
               
chr18:7109288-7108920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
88-473
               

               
Cow position:
               
chr18:3017932-3018322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
88-526
               

               
Cow position:
               
chr18:55788836-55789287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
89-310
               

               
Cow position:
               
chr18:51998686-51998909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 191
               

               
Conread position:
               
90-310
               

               
Cow position:
               
chr18:10214036-10214257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
90-310
               

               
Cow position:
               
chr18:31557002-31557226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
90-310
               

               
Cow position:
               
chr18:52251699-52251924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
90-311
               

               
Cow position:
               
chr18:51643214-51643430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
90-313
               

               
Cow position:
               
chr18:24266248-24266476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
90-332
               

               
Cow position:
               
chr18:41854434-41854683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
90-368
               

               
Cow position:
               
chr18:23623475-23623771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
90-414
               

               
Cow position:
               
chr18:15517019-15517349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
90-417
               

               
Cow position:
               
chr18:346340-346689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
90-483
               

               
Cow position:
               
chr18:17649584-17649989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
90-510
               

               
Cow position:
               
chr18:4668351-4668773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
90-531
               

               
Cow position:
               
chr18:19143349-19143816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
90-551
               

               
Cow position:
               
chr18:52637372-52637855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
90-558
               

               
Cow position:
               
chr18:54572133-54572625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
90-575
               

               
Cow position:
               
chr18:4748732-4749226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
90-590
               

               
Cow position:
               
chr18:46880552-46881043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
90-591
               

               
Cow position:
               
chr18:51827434-51826930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
90-608
               

               
Cow position:
               
chr18:12775626-12776151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
90-623
               

               
Cow position:
               
chr18:39662936-39662384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
90-624
               

               
Cow position:
               
chr18:14586324-14586870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
90-684
               

               
Cow position:
               
chr18:7487390-7486797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
90-701
               

               
Cow position:
               
chr18:55553128-55552494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
90-729
               

               
Cow position:
               
chr18:51757249-51756598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
90-736
               

               
Cow position:
               
chr18:37023382-37024065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 429
               

               
Conread position:
               
90-740
               

               
Cow position:
               
chr18:33300040-33299397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 17
               

               
Conread position:
               
90-740
               

               
Cow position:
               
chr18:43950983-43950329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
90-740
               

               
Cow position:
               
chr18:55692973-55692300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
91-490
               

               
Cow position:
               
chr18:50625224-50625621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
92-736
               

               
Cow position:
               
chr18:47512147-47511502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
93-310
               

               
Cow position:
               
chr18:7963930-7963716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
93-314
               

               
Cow position:
               
chr18:44909204-44908984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
93-338
               

               
Cow position:
               
chr18:8949647-8949893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
204, 71
               

               
Conread position:
               
93-380
               

               
Cow position:
               
chr18:6005349-6005645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
93-385
               

               
Cow position:
               
chr18:19688180-19687864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
93-394
               

               
Cow position:
               
chr18:1392417-1392729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 120
               

               
Conread position:
               
93-430
               

               
Cow position:
               
chr18:39623956-39623598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
93-502
               

               
Cow position:
               
chr18:4489749-4490145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 194
               

               
Conread position:
               
93-531
               

               
Cow position:
               
chr18:33159095-33158654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
93-622
               

               
Cow position:
               
chr18:55701509-55702037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
93-654
               

               
Cow position:
               
chr18:9010857-9010308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
93-692
               

               
Cow position:
               
chr18:22120733-22121343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
93-738
               

               
Cow position:
               
chr18:11184091-11183430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
93-740
               

               
Cow position:
               
chr18:7965384-7964720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
94-520
               

               
Cow position:
               
chr18:20270860-20271309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
94-582
               

               
Cow position:
               
chr18:56181308-56181807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
94-740
               

               
Cow position:
               
chr18:11779804-11779157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
95-464
               

               
Cow position:
               
chr18:4495740-4496122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
95-464
               

               
Cow position:
               
chr18:18961682-18962074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
95-736
               

               
Cow position:
               
chr18:7966394-7965768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
96-637
               

               
Cow position:
               
chr18:9029762-9029219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
97-402
               

               
Cow position:
               
chr18:50974137-50974468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
97-435
               

               
Cow position:
               
chr18:30430913-30430562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
97-477
               

               
Cow position:
               
chr18:35453077-35452695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
97-527
               

               
Cow position:
               
chr18:42454871-42455316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
97-532
               

               
Cow position:
               
chr18:3115604-3115159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
97-740
               

               
Cow position:
               
chr18:37002785-37002124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
98-296
               

               
Cow position:
               
chr18:23169728-23169526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr18:55733559-55733880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
98-431
               

               
Cow position:
               
chr18:44137641-44137293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
98-607
               

               
Cow position:
               
chr18:49200782-49200270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
98-740
               

               
Cow position:
               
chr18:29356486-29357150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
99-306
               

               
Cow position:
               
chr18:23446913-23447124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
99-636
               

               
Cow position:
               
chr18:46108237-46108785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 116
               

               
Conread position:
               
101-312
               

               
Cow position:
               
chr18:34834640-34834427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
102-740
               

               
Cow position:
               
chr18:4927213-4926567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
105-722
               

               
Cow position:
               
chr18:28101770-28101133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr18:52414108-52413898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 201
               

               
Conread position:
               
109-398
               

               
Cow position:
               
chr18:2774002-2774299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
110-421
               

               
Cow position:
               
chr18:8300158-8299822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
122-522
               

               
Cow position:
               
chr18:5995592-5995181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
122-543
               

               
Cow position:
               
chr18:4626012-4625589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
136-442
               

               
Cow position:
               
chr18:45637308-45637608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
192, 89
               

               
Conread position:
               
136-605
               

               
Cow position:
               
chr18:2849161-2849636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
143-425
               

               
Cow position:
               
chr18:19896350-19896651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 90
               

               
Conread position:
               
144-530
               

               
Cow position:
               
chr18:25647149-25647548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
146-473
               

               
Cow position:
               
chr18:33008164-33007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
93, 79
               

               
Conread position:
               
149-740
               

               
Cow position:
               
chr18:30794519-30793949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
152-689
               

               
Cow position:
               
chr18:38687170-38686642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 12
               

               
Conread position:
               
153-428
               

               
Cow position:
               
chr18:52877448-52877181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
159-416
               

               
Cow position:
               
chr18:51190514-51190777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
133, 79
               

               
Conread position:
               
159-734
               

               
Cow position:
               
chr18:55788006-55787426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
160-499
               

               
Cow position:
               
chr18:7952722-7952378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
160-530
               

               
Cow position:
               
chr18:3422781-3422421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
180, 75
               

               
Conread position:
               
162-736
               

               
Cow position:
               
chr18:50082175-50082734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 140
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr18:29760105-29759781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
167-571
               

               
Cow position:
               
chr18:44801812-44802224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 273
               

               
Conread position:
               
167-686
               

               
Cow position:
               
chr18:45571089-45570571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
169-537
               

               
Cow position:
               
chr18:11685057-11684686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 167
               

               
Conread position:
               
202-543
               

               
Cow position:
               
chr18:4381336-4380983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 258
               

               
Conread position:
               
203-422
               

               
Cow position:
               
chr18:36746218-36746447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
207-521
               

               
Cow position:
               
chr18:31586338-31586654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
208-641
               

               
Cow position:
               
chr18:55461670-55462119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 256
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr18:21740780-21740990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
209-429
               

               
Cow position:
               
chr18:54111243-54111020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
209-625
               

               
Cow position:
               
chr18:29796393-29796828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
210-574
               

               
Cow position:
               
chr18:48513307-48513677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
141, 92
               

               
Conread position:
               
211-520
               

               
Cow position:
               
chr18:28923814-28924121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
118, 91
               

               
Conread position:
               
211-528
               

               
Cow position:
               
chr18:13360087-13359765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
211-530
               

               
Cow position:
               
chr18:51212216-51211883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
211-543
               

               
Cow position:
               
chr18:44483740-44484070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 120
               

               
Conread position:
               
211-573
               

               
Cow position:
               
chr18:19619975-19619607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
211-654
               

               
Cow position:
               
chr18:23766376-23766845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 270
               

               
Conread position:
               
211-661
               

               
Cow position:
               
chr18:13507707-13508154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
211-719
               

               
Cow position:
               
chr18:4539849-4540362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
211-737
               

               
Cow position:
               
chr18:30248106-30248625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
211-738
               

               
Cow position:
               
chr18:4182154-4182711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 176
               

               
Conread position:
               
211-740
               

               
Cow position:
               
chr18:35012284-35012816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
213-418
               

               
Cow position:
               
chr18:16686304-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
213-501
               

               
Cow position:
               
chr18:24855812-24856116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
213-526
               

               
Cow position:
               
chr18:23476656-23476965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
213-690
               

               
Cow position:
               
chr18:11322627-11322128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 134
               

               
Conread position:
               
219-570
               

               
Cow position:
               
chr18:8104914-8105283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 223
               

               
Conread position:
               
221-607
               

               
Cow position:
               
chr18:11832143-11831766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
225-736
               

               
Cow position:
               
chr18:14048728-14048216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 146
               

               
Conread position:
               
238-502
               

               
Cow position:
               
chr18:48453694-48453422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 178
               

               
Conread position:
               
240-540
               

               
Cow position:
               
chr18:44548908-44549216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
65, 194
               

               
Conread position:
               
281-549
               

               
Cow position:
               
chr18:48290484-48290756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
335-530
               

               
Cow position:
               
chr18:11680620-11680421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
5, 154
               

               
Conread position:
               
339-519
               

               
Cow position:
               
chr18:25282662-25282843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 147
               

               
Conread position:
               
339-526
               

               
Cow position:
               
chr18:39115248-39115439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 151
               

               
Conread position:
               
339-608
               

               
Cow position:
               
chr18:15880967-15881232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
339-619
               

               
Cow position:
               
chr18:1585226-1585492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
339-737
               

               
Cow position:
               
chr18:43564122-43563715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
339-740
               

               
Cow position:
               
chr18:13293401-13292998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
339-743
               

               
Cow position:
               
chr18:6290678-6290264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 127
               

               
Conread position:
               
340-598
               

               
Cow position:
               
chr18:48407683-48407422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 148
               

               
Conread position:
               
344-555
               

               
Cow position:
               
chr18:56163473-56163266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
344-556
               

               
Cow position:
               
chr18:35827524-35827739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
344-689
               

               
Cow position:
               
chr18:35076271-35075931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 93
               

               
Conread position:
               
344-737
               

               
Cow position:
               
chr18:29388105-29387729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 73
               
Show alignments to all cow chromosomes.