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Cow genome map

           
Conread name:
           
Lng1-LNG010064H09
        

               
Conread position:
               
57-241
               

               
Cow position:
               
chr21:16119875-16120061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
59-402
               

               
Cow position:
               
chr21:44214394-44214048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
69-320
               

               
Cow position:
               
chr21:36763335-36763082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
73-252
               

               
Cow position:
               
chr21:27744298-27744114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
73-376
               

               
Cow position:
               
chr21:41522145-41522457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 5
               

               
Conread position:
               
73-464
               

               
Cow position:
               
chr21:957937-957529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
73-737
               

               
Cow position:
               
chr21:15584154-15584812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
75-515
               

               
Cow position:
               
chr21:47763853-47764300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
77-378
               

               
Cow position:
               
chr21:28919266-28919576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
77-524
               

               
Cow position:
               
chr21:47729727-47730216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 366
               

               
Conread position:
               
77-735
               

               
Cow position:
               
chr21:29213891-29214565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
78-252
               

               
Cow position:
               
chr21:45376212-45376040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
78-258
               

               
Cow position:
               
chr21:18450019-18449836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
78-288
               

               
Cow position:
               
chr21:11182813-11182606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
78-289
               

               
Cow position:
               
chr21:40820587-40820801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
78-299
               

               
Cow position:
               
chr21:13580679-13580455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
78-300
               

               
Cow position:
               
chr21:39394013-39393789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
78-307
               

               
Cow position:
               
chr21:6851429-6851206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
78-314
               

               
Cow position:
               
chr21:21616041-21615811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
78-319
               

               
Cow position:
               
chr21:17252713-17252956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 174
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr21:44724112-44724373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
78-375
               

               
Cow position:
               
chr21:19059827-19060136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
78-385
               

               
Cow position:
               
chr21:18059695-18060016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr21:37789738-37790100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr21:38728420-38728067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
78-430
               

               
Cow position:
               
chr21:23979915-23980286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
78-449
               

               
Cow position:
               
chr21:30222606-30222218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
78-456
               

               
Cow position:
               
chr21:14452497-14452106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
78-461
               

               
Cow position:
               
chr21:20260032-20260456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
78-464
               

               
Cow position:
               
chr21:12461703-12462109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
78-499
               

               
Cow position:
               
chr21:47861445-47861021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
98, 84
               

               
Conread position:
               
78-530
               

               
Cow position:
               
chr21:14464853-14464374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
10, 273
               

               
Conread position:
               
78-531
               

               
Cow position:
               
chr21:6051770-6051302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
78-531
               

               
Cow position:
               
chr21:40134410-40133951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
78-587
               

               
Cow position:
               
chr21:6713259-6713800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
78-636
               

               
Cow position:
               
chr21:47761035-47760467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
78-641
               

               
Cow position:
               
chr21:6834314-6833737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
78-654
               

               
Cow position:
               
chr21:39664131-39664698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
78-669
               

               
Cow position:
               
chr21:641848-641243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
78-688
               

               
Cow position:
               
chr21:37480229-37479596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
78-736
               

               
Cow position:
               
chr21:32297244-32297913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 236
               

               
Conread position:
               
78-740
               

               
Cow position:
               
chr21:643584-642931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 32
               

               
Conread position:
               
78-740
               

               
Cow position:
               
chr21:33982549-33983224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
79-287
               

               
Cow position:
               
chr21:15012694-15012493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
79-288
               

               
Cow position:
               
chr21:25012341-25012135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
79-300
               

               
Cow position:
               
chr21:71849-71628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
79-300
               

               
Cow position:
               
chr21:36682589-36682366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
79-313
               

               
Cow position:
               
chr21:8426706-8426475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
79-313
               

               
Cow position:
               
chr21:16794057-16793812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
79-314
               

               
Cow position:
               
chr21:742537-742314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
79-379
               

               
Cow position:
               
chr21:13656371-13656682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
79-380
               

               
Cow position:
               
chr21:17890566-17890249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
79-380
               

               
Cow position:
               
chr21:22014454-22014133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
79-462
               

               
Cow position:
               
chr21:17874927-17875332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
79-463
               

               
Cow position:
               
chr21:20153220-20152810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
79-464
               

               
Cow position:
               
chr21:48233913-48234297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
79-482
               

               
Cow position:
               
chr21:41590303-41590713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
79-502
               

               
Cow position:
               
chr21:32339482-32339912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
79-508
               

               
Cow position:
               
chr21:802060-802475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
79-512
               

               
Cow position:
               
chr21:32559108-32559539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
79-540
               

               
Cow position:
               
chr21:23535976-23535500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 136
               

               
Conread position:
               
79-562
               

               
Cow position:
               
chr21:27568896-27569400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 172
               

               
Conread position:
               
79-710
               

               
Cow position:
               
chr21:938284-937667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
79-736
               

               
Cow position:
               
chr21:20262084-20262747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
79-736
               

               
Cow position:
               
chr21:27229540-27230202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
79-737
               

               
Cow position:
               
chr21:37299723-37299055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
79-740
               

               
Cow position:
               
chr21:82322-81658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 34
               

               
Conread position:
               
79-748
               

               
Cow position:
               
chr21:24296502-24297183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 364
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr21:13842755-13842530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr21:28030541-28030330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
80-313
               

               
Cow position:
               
chr21:22851177-22850950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
80-325
               

               
Cow position:
               
chr21:14126534-14126297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
83-531
               

               
Cow position:
               
chr21:22861251-22860798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
84-245
               

               
Cow position:
               
chr21:8351036-8351197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
84-314
               

               
Cow position:
               
chr21:19240620-19240846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
87-247
               

               
Cow position:
               
chr21:44732788-44732949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
87-251
               

               
Cow position:
               
chr21:7460860-7460697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
87-312
               

               
Cow position:
               
chr21:19868707-19868925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
87-333
               

               
Cow position:
               
chr21:46599613-46599361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
87-415
               

               
Cow position:
               
chr21:22209988-22210333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
87-503
               

               
Cow position:
               
chr21:17184173-17183745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
87-523
               

               
Cow position:
               
chr21:38449197-38449648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
87-528
               

               
Cow position:
               
chr21:27521087-27521526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
87-528
               

               
Cow position:
               
chr21:47464864-47465325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
87-543
               

               
Cow position:
               
chr21:30592059-30592514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
87-637
               

               
Cow position:
               
chr21:34654325-34653775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
87-649
               

               
Cow position:
               
chr21:24858571-24857988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 418
               

               
Conread position:
               
87-649
               

               
Cow position:
               
chr21:41974112-41974700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 424
               

               
Conread position:
               
87-654
               

               
Cow position:
               
chr21:20160933-20160357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
87-655
               

               
Cow position:
               
chr21:11644711-11645315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
87-693
               

               
Cow position:
               
chr21:44565474-44566066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
87-695
               

               
Cow position:
               
chr21:23822407-23821801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
88-248
               

               
Cow position:
               
chr21:40930222-40930382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
90-257
               

               
Cow position:
               
chr21:15271187-15271353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 112
               

               
Conread position:
               
90-271
               

               
Cow position:
               
chr21:22211508-22211323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
90-289
               

               
Cow position:
               
chr21:2536884-2537087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
90-306
               

               
Cow position:
               
chr21:8430845-8431065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
90-310
               

               
Cow position:
               
chr21:36695838-36696058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
90-311
               

               
Cow position:
               
chr21:17842743-17842966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
90-327
               

               
Cow position:
               
chr21:19561312-19561559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
90-328
               

               
Cow position:
               
chr21:17519280-17519035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
90-352
               

               
Cow position:
               
chr21:16604062-16604338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
90-383
               

               
Cow position:
               
chr21:868667-868982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
90-396
               

               
Cow position:
               
chr21:19067785-19067459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
90-399
               

               
Cow position:
               
chr21:24343013-24343338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
90-402
               

               
Cow position:
               
chr21:16570141-16569825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
90-464
               

               
Cow position:
               
chr21:17638147-17637760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
90-527
               

               
Cow position:
               
chr21:3763499-3763936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
90-530
               

               
Cow position:
               
chr21:29001894-29002365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
90-531
               

               
Cow position:
               
chr21:8618513-8618070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
90-588
               

               
Cow position:
               
chr21:44251589-44252090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
90-635
               

               
Cow position:
               
chr21:11739867-11740439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
90-735
               

               
Cow position:
               
chr21:18289929-18289254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
90-737
               

               
Cow position:
               
chr21:7673365-7672710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
90-737
               

               
Cow position:
               
chr21:27863267-27863932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
90-738
               

               
Cow position:
               
chr21:29069071-29069731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 416
               

               
Conread position:
               
90-740
               

               
Cow position:
               
chr21:10264287-10263626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
90-740
               

               
Cow position:
               
chr21:22718531-22719189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
93-289
               

               
Cow position:
               
chr21:41287547-41287741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
93-299
               

               
Cow position:
               
chr21:24875601-24875394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
93-300
               

               
Cow position:
               
chr21:16498764-16498560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
93-319
               

               
Cow position:
               
chr21:24266312-24266544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 122
               

               
Conread position:
               
93-408
               

               
Cow position:
               
chr21:41107527-41107844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
93-424
               

               
Cow position:
               
chr21:10561336-10561682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
93-470
               

               
Cow position:
               
chr21:7824941-7825320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
93-473
               

               
Cow position:
               
chr21:44963046-44962647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
93-498
               

               
Cow position:
               
chr21:10007388-10007812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
93-512
               

               
Cow position:
               
chr21:28028048-28027618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 120
               

               
Conread position:
               
93-525
               

               
Cow position:
               
chr21:3360767-3361212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
93-532
               

               
Cow position:
               
chr21:3498743-3498293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
93-566
               

               
Cow position:
               
chr21:40899590-40899096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
93-601
               

               
Cow position:
               
chr21:41156120-41155587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
93-740
               

               
Cow position:
               
chr21:19958465-19957816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
95-300
               

               
Cow position:
               
chr21:20163954-20163749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
95-399
               

               
Cow position:
               
chr21:47719057-47719372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
95-522
               

               
Cow position:
               
chr21:42135372-42135819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
96-283
               

               
Cow position:
               
chr21:8506301-8506488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
96-283
               

               
Cow position:
               
chr21:8509189-8509376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
96-692
               

               
Cow position:
               
chr21:45151379-45151998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 118
               

               
Conread position:
               
97-477
               

               
Cow position:
               
chr21:12748991-12749376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
97-502
               

               
Cow position:
               
chr21:41198152-41198586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
98-445
               

               
Cow position:
               
chr21:18155320-18155693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
98-690
               

               
Cow position:
               
chr21:46776753-46777338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
98-740
               

               
Cow position:
               
chr21:5595874-5595248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
99-380
               

               
Cow position:
               
chr21:828967-829256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
99-661
               

               
Cow position:
               
chr21:19195918-19196502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 114
               

               
Conread position:
               
102-429
               

               
Cow position:
               
chr21:7785460-7785126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
102-740
               

               
Cow position:
               
chr21:22856460-22855807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
108-425
               

               
Cow position:
               
chr21:21633070-21633401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
113-616
               

               
Cow position:
               
chr21:25127834-25127320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
114-740
               

               
Cow position:
               
chr21:4904738-4905384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
124-499
               

               
Cow position:
               
chr21:27145772-27146164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
124-512
               

               
Cow position:
               
chr21:9990727-9990329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
136-482
               

               
Cow position:
               
chr21:18800331-18800685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
138-713
               

               
Cow position:
               
chr21:15976833-15976254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
138-737
               

               
Cow position:
               
chr21:7564106-7564734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
143-310
               

               
Cow position:
               
chr21:19359980-19360145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
143-441
               

               
Cow position:
               
chr21:2658005-2657704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 59
               

               
Conread position:
               
143-489
               

               
Cow position:
               
chr21:27624895-27624550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
143-531
               

               
Cow position:
               
chr21:29485174-29484780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 21
               

               
Conread position:
               
143-603
               

               
Cow position:
               
chr21:36795801-36795323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 289
               

               
Conread position:
               
143-667
               

               
Cow position:
               
chr21:42384705-42384166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
144-425
               

               
Cow position:
               
chr21:35437292-35437564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
144-590
               

               
Cow position:
               
chr21:33350938-33350481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 354
               

               
Conread position:
               
144-615
               

               
Cow position:
               
chr21:36297689-36297190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
144-641
               

               
Cow position:
               
chr21:46264365-46263862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 24
               

               
Conread position:
               
146-562
               

               
Cow position:
               
chr21:33912-33487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
148-693
               

               
Cow position:
               
chr21:4399996-4399432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 152
               

               
Conread position:
               
149-478
               

               
Cow position:
               
chr21:45920867-45921211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
149-693
               

               
Cow position:
               
chr21:45473567-45474123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 14
               

               
Conread position:
               
149-706
               

               
Cow position:
               
chr21:26245106-26244557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
167, 260
               

               
Conread position:
               
154-559
               

               
Cow position:
               
chr21:42348511-42348911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 45
               

               
Conread position:
               
155-482
               

               
Cow position:
               
chr21:10001259-10000924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
158-719
               

               
Cow position:
               
chr21:5153801-5153223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
160-462
               

               
Cow position:
               
chr21:12723332-12723020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
162-636
               

               
Cow position:
               
chr21:396046-395568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
162-734
               

               
Cow position:
               
chr21:25764814-25764226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
164-530
               

               
Cow position:
               
chr21:45356010-45355633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
170-653
               

               
Cow position:
               
chr21:38121272-38120775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 245
               

               
Conread position:
               
175-740
               

               
Cow position:
               
chr21:33997063-33997639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
195-740
               

               
Cow position:
               
chr21:28512661-28512126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
200-529
               

               
Cow position:
               
chr21:47066761-47067089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
202-740
               

               
Cow position:
               
chr21:42540083-42540636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 278
               

               
Conread position:
               
208-503
               

               
Cow position:
               
chr21:13488660-13488343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 220
               

               
Conread position:
               
208-608
               

               
Cow position:
               
chr21:30606953-30607385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 182
               

               
Conread position:
               
211-397
               

               
Cow position:
               
chr21:45262680-45262883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
211-428
               

               
Cow position:
               
chr21:22465321-22465095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
211-526
               

               
Cow position:
               
chr21:13738683-13738372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
211-529
               

               
Cow position:
               
chr21:41597941-41597613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
117, 90
               

               
Conread position:
               
211-530
               

               
Cow position:
               
chr21:45330477-45330811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
79, 68
               

               
Conread position:
               
211-663
               

               
Cow position:
               
chr21:16187677-16188147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 210
               

               
Conread position:
               
211-737
               

               
Cow position:
               
chr21:4998365-4998897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
211-740
               

               
Cow position:
               
chr21:724755-725303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
211-740
               

               
Cow position:
               
chr21:33210318-33209786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
212-478
               

               
Cow position:
               
chr21:24642649-24642366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
213-451
               

               
Cow position:
               
chr21:20193022-20192777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
213-470
               

               
Cow position:
               
chr21:35354659-35354393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
77, 233
               

               
Conread position:
               
213-524
               

               
Cow position:
               
chr21:18941706-18942025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
213-691
               

               
Cow position:
               
chr21:19363331-19363816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 210
               

               
Conread position:
               
213-725
               

               
Cow position:
               
chr21:44515392-44514867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 152
               

               
Conread position:
               
213-736
               

               
Cow position:
               
chr21:28442860-28442325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 86
               

               
Conread position:
               
213-736
               

               
Cow position:
               
chr21:34390847-34391377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 229
               

               
Conread position:
               
214-736
               

               
Cow position:
               
chr21:24131196-24130675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 120
               

               
Conread position:
               
215-461
               

               
Cow position:
               
chr21:17856670-17856408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
77, 176
               

               
Conread position:
               
217-721
               

               
Cow position:
               
chr21:2367456-2366945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 207
               

               
Conread position:
               
220-561
               

               
Cow position:
               
chr21:41878592-41878241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 214
               

               
Conread position:
               
225-740
               

               
Cow position:
               
chr21:24222421-24222954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 252
               

               
Conread position:
               
225-740
               

               
Cow position:
               
chr21:24607502-24606981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 275
               

               
Conread position:
               
229-614
               

               
Cow position:
               
chr21:2679669-2679271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 275
               

               
Conread position:
               
233-698
               

               
Cow position:
               
chr21:4795334-4794848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 160
               

               
Conread position:
               
233-736
               

               
Cow position:
               
chr21:2904370-2904874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
239-616
               

               
Cow position:
               
chr21:11640123-11639731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
65, 5
               

               
Conread position:
               
240-586
               

               
Cow position:
               
chr21:21223383-21223024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
246-472
               

               
Cow position:
               
chr21:18041752-18041989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 201
               

               
Conread position:
               
260-649
               

               
Cow position:
               
chr21:7132397-7132784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
291-609
               

               
Cow position:
               
chr21:28443332-28443644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
39, 148
               

               
Conread position:
               
308-740
               

               
Cow position:
               
chr21:9862617-9863039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
327-522
               

               
Cow position:
               
chr21:13585069-13585253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
332-637
               

               
Cow position:
               
chr21:2785781-2786103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 198
               

               
Conread position:
               
332-736
               

               
Cow position:
               
chr21:30848953-30849348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
337-616
               

               
Cow position:
               
chr21:10727266-10726991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 70
               

               
Conread position:
               
338-558
               

               
Cow position:
               
chr21:31676487-31676269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
339-483
               

               
Cow position:
               
chr21:31511273-31511136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
339-570
               

               
Cow position:
               
chr21:5636731-5636965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 148
               

               
Conread position:
               
339-573
               

               
Cow position:
               
chr21:46242250-46242480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
339-606
               

               
Cow position:
               
chr21:36793879-36793602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
339-704
               

               
Cow position:
               
chr21:31159250-31158876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
339-710
               

               
Cow position:
               
chr21:18494956-18494595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 149
               

               
Conread position:
               
339-710
               

               
Cow position:
               
chr21:35897645-35898006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 74
               

               
Conread position:
               
339-729
               

               
Cow position:
               
chr21:25383001-25382594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
339-736
               

               
Cow position:
               
chr21:33419734-33420127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
339-740
               

               
Cow position:
               
chr21:18935748-18935357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 145
               

               
Conread position:
               
341-729
               

               
Cow position:
               
chr21:48263107-48262726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 59
               

               
Conread position:
               
343-713
               

               
Cow position:
               
chr21:14126031-14125673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
344-619
               

               
Cow position:
               
chr21:40058787-40058512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 138
               

               
Conread position:
               
344-740
               

               
Cow position:
               
chr21:17410674-17411082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
75, 144
               

               
Conread position:
               
345-740
               

               
Cow position:
               
chr21:911986-912376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 139
               

               
Conread position:
               
346-482
               

               
Cow position:
               
chr21:43631219-43631359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               
Show alignments to all cow chromosomes.