Cow genome map

Conread name: Lng1-LNG010064H09

Conread position: 55-397
Cow position:
Alignm length: 362
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 107

Conread position: 72-298
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 78

Conread position: 72-425
Cow position:
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 94

Conread position: 75-380
Cow position:
Alignm length: 323
Alignm identity: 211
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 133

Conread position: 78-278
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 78-312
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 87

Conread position: 78-313
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 60

Conread position: 78-319
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 29

Conread position: 78-321
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 165

Conread position: 78-376
Cow position:
Alignm length: 315
Alignm identity: 211
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 10, 98

Conread position: 78-391
Cow position:
Alignm length: 322
Alignm identity: 216
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 89

Conread position: 78-396
Cow position:
Alignm length: 337
Alignm identity: 216
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 195

Conread position: 78-422
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 10, 175

Conread position: 78-426
Cow position:
Alignm length: 378
Alignm identity: 264
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 54

Conread position: 78-428
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 156

Conread position: 78-482
Cow position:
Alignm length: 420
Alignm identity: 280
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 102

Conread position: 78-501
Cow position:
Alignm length: 444
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 83

Conread position: 78-515
Cow position:
Alignm length: 463
Alignm identity: 311
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 81

Conread position: 78-520
Cow position:
Alignm length: 460
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 99

Conread position: 78-530
Cow position:
Alignm length: 489
Alignm identity: 319
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 46

Conread position: 78-531
Cow position:
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 186

Conread position: 78-531
Cow position:
Alignm length: 462
Alignm identity: 300
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 146

Conread position: 78-551
Cow position:
Alignm length: 498
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 100

Conread position: 78-572
Cow position:
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 88

Conread position: 78-591
Cow position:
Alignm length: 533
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 153

Conread position: 78-591
Cow position:
Alignm length: 535
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 100

Conread position: 78-658
Cow position:
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 94

Conread position: 78-705
Cow position:
Alignm length: 650
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 340

Conread position: 78-734
Cow position:
Alignm length: 699
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 29

Conread position: 78-740
Cow position:
Alignm length: 679
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 78-740
Cow position:
Alignm length: 681
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 33

Conread position: 79-270
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 67

Conread position: 79-313
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 36

Conread position: 79-421
Cow position:
Alignm length: 361
Alignm identity: 251
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 79

Conread position: 79-530
Cow position:
Alignm length: 469
Alignm identity: 300
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 214, 15

Conread position: 79-608
Cow position:
Alignm length: 542
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 80-239
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 82

Conread position: 80-301
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 126, 31

Conread position: 80-314
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 230

Conread position: 80-314
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 76

Conread position: 80-705
Cow position:
Alignm length: 648
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 90

Conread position: 86-420
Cow position:
Alignm length: 358
Alignm identity: 236
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 8

Conread position: 86-735
Cow position:
Alignm length: 676
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 105

Conread position: 87-300
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 87-464
Cow position:
Alignm length: 409
Alignm identity: 279
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 57, 23

Conread position: 87-472
Cow position:
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 73

Conread position: 87-515
Cow position:
Alignm length: 446
Alignm identity: 301
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 59

Conread position: 87-623
Cow position:
Alignm length: 546
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 79

Conread position: 88-295
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 78

Conread position: 88-528
Cow position:
Alignm length: 461
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 71

Conread position: 89-386
Cow position:
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 125

Conread position: 90-304
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 92

Conread position: 90-326
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 115

Conread position: 90-515
Cow position:
Alignm length: 455
Alignm identity: 296
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 181

Conread position: 90-528
Cow position:
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 118

Conread position: 90-532
Cow position:
Alignm length: 461
Alignm identity: 305
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 199, 20

Conread position: 90-534
Cow position:
Alignm length: 475
Alignm identity: 313
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 211, 20

Conread position: 90-627
Cow position:
Alignm length: 571
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 90-632
Cow position:
Alignm length: 573
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 100

Conread position: 90-736
Cow position:
Alignm length: 692
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 90-740
Cow position:
Alignm length: 679
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 23

Conread position: 92-731
Cow position:
Alignm length: 660
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 93-327
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 37

Conread position: 93-414
Cow position:
Alignm length: 342
Alignm identity: 222
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 70

Conread position: 93-422
Cow position:
Alignm length: 358
Alignm identity: 251
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 142

Conread position: 93-422
Cow position:
Alignm length: 344
Alignm identity: 242
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 94, 18

Conread position: 93-523
Cow position:
Alignm length: 451
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 93-532
Cow position:
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 65

Conread position: 93-604
Cow position:
Alignm length: 524
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 11

Conread position: 94-582
Cow position:
Alignm length: 519
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 112

Conread position: 96-246
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 97-334
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 47

Conread position: 97-625
Cow position:
Alignm length: 551
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 92

Conread position: 98-655
Cow position:
Alignm length: 583
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 98-736
Cow position:
Alignm length: 673
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 102-731
Cow position:
Alignm length: 655
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 91

Conread position: 106-515
Cow position:
Alignm length: 414
Alignm identity: 273
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 78, 49

Conread position: 109-482
Cow position:
Alignm length: 386
Alignm identity: 255
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 90, 45

Conread position: 115-740
Cow position:
Alignm length: 634
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 71

Conread position: 122-474
Cow position:
Alignm length: 368
Alignm identity: 245
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 89

Conread position: 122-503
Cow position:
Alignm length: 405
Alignm identity: 263
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 180, 7

Conread position: 132-653
Cow position:
Alignm length: 539
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 34

Conread position: 136-370
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 159, 0

Conread position: 136-601
Cow position:
Alignm length: 487
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 32

Conread position: 143-449
Cow position:
Alignm length: 330
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 98, 23

Conread position: 144-310
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 156, 0

Conread position: 144-436
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 113, 20

Conread position: 144-471
Cow position:
Alignm length: 349
Alignm identity: 241
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 148, 25

Conread position: 144-474
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 149, 302

Conread position: 145-705
Cow position:
Alignm length: 585
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 151-453
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 84

Conread position: 190-518
Cow position:
Alignm length: 336
Alignm identity: 223
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 9, 19

Conread position: 205-395
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 31

Conread position: 208-692
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 94

Conread position: 208-740
Cow position:
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 220

Conread position: 209-454
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 197

Conread position: 211-540
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 64, 288

Conread position: 211-697
Cow position:
Alignm length: 507
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 43

Conread position: 213-426
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 97

Conread position: 213-504
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 21

Conread position: 213-543
Cow position:
Alignm length: 347
Alignm identity: 235
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 83, 21

Conread position: 226-740
Cow position:
Alignm length: 544
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 228-734
Cow position:
Alignm length: 517
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 111

Conread position: 261-421
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 263-588
Cow position:
Alignm length: 344
Alignm identity: 242
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 48, 30

Conread position: 278-698
Cow position:
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 216

Conread position: 329-698
Cow position:
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 99

Conread position: 337-641
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 63

Conread position: 338-460
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 338-709
Cow position:
Alignm length: 376
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 129

Conread position: 339-547
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 339-736
Cow position:
Alignm length: 400
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 92

Conread position: 339-737
Cow position:
Alignm length: 420
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 39

Conread position: 339-737
Cow position:
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 70

Conread position: 340-737
Cow position:
Alignm length: 400
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 60

Conread position: 340-740
Cow position:
Alignm length: 413
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 152

Show alignments to all cow chromosomes.