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Cow genome map

           
Conread name:
           
Lng1-LNG010064H09
        

               
Conread position:
               
58-311
               

               
Cow position:
               
chr29:30827625-30827372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
61-649
               

               
Cow position:
               
chr29:19125544-19124972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
64-288
               

               
Cow position:
               
chr29:36781097-36781317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
69-327
               

               
Cow position:
               
chr29:38979871-38980128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
72-438
               

               
Cow position:
               
chr29:9310811-9310452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
72-542
               

               
Cow position:
               
chr29:5063348-5062852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr29:26540337-26540565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
75-700
               

               
Cow position:
               
chr29:35292288-35291658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
77-254
               

               
Cow position:
               
chr29:17282263-17282089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
77-736
               

               
Cow position:
               
chr29:36531066-36530388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
77-740
               

               
Cow position:
               
chr29:4479965-4480642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 194
               

               
Conread position:
               
78-241
               

               
Cow position:
               
chr29:40112578-40112416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
78-272
               

               
Cow position:
               
chr29:14577056-14576862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
78-276
               

               
Cow position:
               
chr29:43088507-43088310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
78-285
               

               
Cow position:
               
chr29:22729767-22729558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
78-286
               

               
Cow position:
               
chr29:19363908-19363700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
78-300
               

               
Cow position:
               
chr29:31982021-31981806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
78-312
               

               
Cow position:
               
chr29:22734907-22735142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
78-312
               

               
Cow position:
               
chr29:28813773-28814019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
78-327
               

               
Cow position:
               
chr29:18449939-18450192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
78-327
               

               
Cow position:
               
chr29:21666285-21666030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
78-408
               

               
Cow position:
               
chr29:35084024-35084370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr29:25814636-25814999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
78-499
               

               
Cow position:
               
chr29:24293069-24292642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
78-514
               

               
Cow position:
               
chr29:25737220-25737669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 32
               

               
Conread position:
               
78-518
               

               
Cow position:
               
chr29:8926250-8926715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
78-529
               

               
Cow position:
               
chr29:17462579-17463046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
78-736
               

               
Cow position:
               
chr29:19756636-19755971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
78-736
               

               
Cow position:
               
chr29:31786873-31786211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
78-737
               

               
Cow position:
               
chr29:19762463-19761798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
79-290
               

               
Cow position:
               
chr29:9378833-9378622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
79-332
               

               
Cow position:
               
chr29:4070821-4070569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
79-351
               

               
Cow position:
               
chr29:20770542-20770259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
79-428
               

               
Cow position:
               
chr29:22028763-22029106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
79-430
               

               
Cow position:
               
chr29:5408944-5409316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
79-482
               

               
Cow position:
               
chr29:22613619-22613210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
213, 79
               

               
Conread position:
               
79-482
               

               
Cow position:
               
chr29:23698168-23697757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
79-498
               

               
Cow position:
               
chr29:19949503-19949073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
79-521
               

               
Cow position:
               
chr29:11562824-11562355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 348
               

               
Conread position:
               
79-596
               

               
Cow position:
               
chr29:10058345-10058862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 31
               

               
Conread position:
               
79-635
               

               
Cow position:
               
chr29:28195335-28195893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
79-646
               

               
Cow position:
               
chr29:28196820-28197393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
79-659
               

               
Cow position:
               
chr29:35501467-35502045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
79-690
               

               
Cow position:
               
chr29:17110151-17109542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 85
               

               
Conread position:
               
80-327
               

               
Cow position:
               
chr29:44139046-44139303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
80-649
               

               
Cow position:
               
chr29:43080410-43080996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
33, 224
               

               
Conread position:
               
85-314
               

               
Cow position:
               
chr29:30548965-30548737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
86-499
               

               
Cow position:
               
chr29:19253637-19254063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
86-706
               

               
Cow position:
               
chr29:24952878-24952235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
86-740
               

               
Cow position:
               
chr29:21443150-21443826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
87-300
               

               
Cow position:
               
chr29:36357318-36357104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 153
               

               
Conread position:
               
87-498
               

               
Cow position:
               
chr29:34773559-34773964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
87-530
               

               
Cow position:
               
chr29:12680348-12679886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 419
               

               
Conread position:
               
87-557
               

               
Cow position:
               
chr29:22162074-22162553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 23
               

               
Conread position:
               
87-616
               

               
Cow position:
               
chr29:5893036-5892495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
87-635
               

               
Cow position:
               
chr29:40117755-40117197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
87-735
               

               
Cow position:
               
chr29:26779066-26778414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
87-736
               

               
Cow position:
               
chr29:40763506-40764145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
87-740
               

               
Cow position:
               
chr29:41112700-41113328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
88-526
               

               
Cow position:
               
chr29:4491864-4492301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
89-300
               

               
Cow position:
               
chr29:17804718-17804510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
89-390
               

               
Cow position:
               
chr29:34358791-34359109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
89-520
               

               
Cow position:
               
chr29:34744443-34744876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
90-252
               

               
Cow position:
               
chr29:4441018-4441181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
90-257
               

               
Cow position:
               
chr29:13558524-13558351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
90-269
               

               
Cow position:
               
chr29:18878295-18878475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
90-300
               

               
Cow position:
               
chr29:15947356-15947142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
90-314
               

               
Cow position:
               
chr29:16290910-16290688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
90-327
               

               
Cow position:
               
chr29:4492619-4492383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
90-372
               

               
Cow position:
               
chr29:5046840-5046541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
90-424
               

               
Cow position:
               
chr29:17297325-17296968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
90-426
               

               
Cow position:
               
chr29:31674818-31674465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
90-440
               

               
Cow position:
               
chr29:37618495-37618126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
90-453
               

               
Cow position:
               
chr29:26259663-26259283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
90-477
               

               
Cow position:
               
chr29:31489511-31489103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
90-481
               

               
Cow position:
               
chr29:28739814-28739408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
90-510
               

               
Cow position:
               
chr29:17222603-17222160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
90-531
               

               
Cow position:
               
chr29:41531038-41530581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
90-534
               

               
Cow position:
               
chr29:23845027-23844545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
90-540
               

               
Cow position:
               
chr29:14501782-14501316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
90-540
               

               
Cow position:
               
chr29:39111137-39111586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
90-634
               

               
Cow position:
               
chr29:23874649-23874084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
90-653
               

               
Cow position:
               
chr29:29588738-29589305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
90-674
               

               
Cow position:
               
chr29:20673621-20674219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
90-740
               

               
Cow position:
               
chr29:7955801-7956445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
90-740
               

               
Cow position:
               
chr29:34745474-34746134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
91-636
               

               
Cow position:
               
chr29:1306677-1307238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
93-289
               

               
Cow position:
               
chr29:7290953-7290762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
93-300
               

               
Cow position:
               
chr29:5568676-5568465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 120
               

               
Conread position:
               
93-308
               

               
Cow position:
               
chr29:32197878-32197664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
93-325
               

               
Cow position:
               
chr29:29324236-29324469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
93-330
               

               
Cow position:
               
chr29:23114816-23115055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
93-371
               

               
Cow position:
               
chr29:7624349-7624074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
197, 17
               

               
Conread position:
               
93-526
               

               
Cow position:
               
chr29:29769170-29769610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
93-677
               

               
Cow position:
               
chr29:20626754-20626170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
93-684
               

               
Cow position:
               
chr29:26017316-26017934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
93-735
               

               
Cow position:
               
chr29:13639185-13639827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
93-740
               

               
Cow position:
               
chr29:2744085-2744750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
94-736
               

               
Cow position:
               
chr29:1933387-1934036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
95-438
               

               
Cow position:
               
chr29:12900371-12900724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
96-301
               

               
Cow position:
               
chr29:22723777-22723575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
96-307
               

               
Cow position:
               
chr29:23825031-23825242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
96-311
               

               
Cow position:
               
chr29:1007999-1007786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
96-333
               

               
Cow position:
               
chr29:36249219-36248971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
96-446
               

               
Cow position:
               
chr29:43099568-43099927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
96-451
               

               
Cow position:
               
chr29:44988623-44988972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
97-311
               

               
Cow position:
               
chr29:5830837-5831054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
97-646
               

               
Cow position:
               
chr29:38582150-38581584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
98-310
               

               
Cow position:
               
chr29:27524654-27524868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
98-375
               

               
Cow position:
               
chr29:22648026-22647736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
98-405
               

               
Cow position:
               
chr29:24046177-24045846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
98-428
               

               
Cow position:
               
chr29:10018747-10018407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
98-430
               

               
Cow position:
               
chr29:23951398-23951738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
98-522
               

               
Cow position:
               
chr29:19389659-19389226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
98-736
               

               
Cow position:
               
chr29:35435038-35434394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
98-740
               

               
Cow position:
               
chr29:15738170-15738825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
98-740
               

               
Cow position:
               
chr29:15944740-15944092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
99-368
               

               
Cow position:
               
chr29:17168583-17168298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
99-522
               

               
Cow position:
               
chr29:44236620-44236208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
102-460
               

               
Cow position:
               
chr29:3100093-3100461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
102-522
               

               
Cow position:
               
chr29:3237176-3237619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
102-736
               

               
Cow position:
               
chr29:21932946-21933609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
102-737
               

               
Cow position:
               
chr29:465223-465876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
109-414
               

               
Cow position:
               
chr29:7425797-7425482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 102
               

               
Conread position:
               
109-736
               

               
Cow position:
               
chr29:45005459-45006092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
109-740
               

               
Cow position:
               
chr29:29057342-29056700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
109-741
               

               
Cow position:
               
chr29:32733461-32732853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
110-411
               

               
Cow position:
               
chr29:9454894-9455204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 76
               

               
Conread position:
               
113-617
               

               
Cow position:
               
chr29:29975201-29974689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
118-512
               

               
Cow position:
               
chr29:1557084-1556682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
123-439
               

               
Cow position:
               
chr29:28166072-28166391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
172, 41
               

               
Conread position:
               
136-430
               

               
Cow position:
               
chr29:27589060-27588756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
136-531
               

               
Cow position:
               
chr29:25333322-25333722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 99
               

               
Conread position:
               
139-737
               

               
Cow position:
               
chr29:26130911-26130317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
143-430
               

               
Cow position:
               
chr29:23243746-23244049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
143-729
               

               
Cow position:
               
chr29:10156176-10156755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
143-736
               

               
Cow position:
               
chr29:18085704-18085099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 157
               

               
Conread position:
               
144-452
               

               
Cow position:
               
chr29:32210942-32211251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
184, 19
               

               
Conread position:
               
144-490
               

               
Cow position:
               
chr29:40298889-40299243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
145-312
               

               
Cow position:
               
chr29:38978661-38978495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
145-428
               

               
Cow position:
               
chr29:26653915-26654204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
147-516
               

               
Cow position:
               
chr29:6286035-6286416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
147-528
               

               
Cow position:
               
chr29:356448-356060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
154-750
               

               
Cow position:
               
chr29:36217233-36216631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 82
               

               
Conread position:
               
162-511
               

               
Cow position:
               
chr29:20903177-20903537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
117, 143
               

               
Conread position:
               
164-740
               

               
Cow position:
               
chr29:39567792-39567208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
177-511
               

               
Cow position:
               
chr29:23983857-23984213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
123, 329
               

               
Conread position:
               
202-581
               

               
Cow position:
               
chr29:13372736-13372346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
206-740
               

               
Cow position:
               
chr29:6926074-6925538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
209-481
               

               
Cow position:
               
chr29:19821349-19821076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
209-691
               

               
Cow position:
               
chr29:17607484-17606985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 289
               

               
Conread position:
               
210-649
               

               
Cow position:
               
chr29:4367791-4367349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
210-729
               

               
Cow position:
               
chr29:17047-17561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 8
               

               
Conread position:
               
211-398
               

               
Cow position:
               
chr29:4002956-4002759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
211-399
               

               
Cow position:
               
chr29:27329957-27329754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
211-430
               

               
Cow position:
               
chr29:44682040-44682266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
211-463
               

               
Cow position:
               
chr29:43009020-43009287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 215
               

               
Conread position:
               
211-481
               

               
Cow position:
               
chr29:463590-463874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
211-487
               

               
Cow position:
               
chr29:868839-868546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
211-510
               

               
Cow position:
               
chr29:26726233-26725916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 290
               

               
Conread position:
               
211-523
               

               
Cow position:
               
chr29:26319230-26318933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
211-531
               

               
Cow position:
               
chr29:40166308-40165973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 247
               

               
Conread position:
               
211-614
               

               
Cow position:
               
chr29:6293414-6293817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 233
               

               
Conread position:
               
211-636
               

               
Cow position:
               
chr29:35485310-35484870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 210
               

               
Conread position:
               
211-637
               

               
Cow position:
               
chr29:26615656-26616112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
211-740
               

               
Cow position:
               
chr29:17409399-17408855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 293
               

               
Conread position:
               
212-530
               

               
Cow position:
               
chr29:5098703-5099030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 204
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr29:5186431-5186692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
213-728
               

               
Cow position:
               
chr29:43496101-43495599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
216-748
               

               
Cow position:
               
chr29:18211939-18212486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
218-572
               

               
Cow position:
               
chr29:10456508-10456863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
229-503
               

               
Cow position:
               
chr29:24119694-24119978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 193
               

               
Conread position:
               
317-497
               

               
Cow position:
               
chr29:28446309-28446494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
336-649
               

               
Cow position:
               
chr29:28868561-28868243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 152
               

               
Conread position:
               
338-529
               

               
Cow position:
               
chr29:4805155-4804966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
338-543
               

               
Cow position:
               
chr29:3502975-3502778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
339-449
               

               
Cow position:
               
chr29:4334650-4334539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
339-530
               

               
Cow position:
               
chr29:2522494-2522310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
339-537
               

               
Cow position:
               
chr29:4066008-4065814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
182, 126
               

               
Conread position:
               
339-539
               

               
Cow position:
               
chr29:3396028-3395833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
339-740
               

               
Cow position:
               
chr29:44233028-44233418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 75
               

               
Conread position:
               
347-740
               

               
Cow position:
               
chr29:26334472-26334865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
86, 141
               

               
Conread position:
               
350-701
               

               
Cow position:
               
chr29:12309905-12309558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 48
               
Show alignments to all cow chromosomes.