Cow genome map

Conread name: Lng1-LNG010064H09

Conread position: 55-307
Cow position: chr5:22795457-22795213 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 14

Conread position: 59-740
Cow position: chr5:29903297-29903975 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 75

Conread position: 69-242
Cow position: chr5:34787808-34787635 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 5

Conread position: 69-733
Cow position: chr5:3582791-3582131 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 95

Conread position: 72-314
Cow position: chr5:69099952-69099709 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 100

Conread position: 72-477
Cow position: chr5:69731719-69731328 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 275
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 42

Conread position: 73-409
Cow position: chr5:12557054-12557410 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 15, 344

Conread position: 74-272
Cow position: chr5:15991414-15991608 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 84

Conread position: 74-273
Cow position: chr5:34288023-34288220 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 100

Conread position: 75-300
Cow position: chr5:23209189-23208960 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 138

Conread position: 75-478
Cow position: chr5:4221209-4220790 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 279
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 13

Conread position: 75-740
Cow position: chr5:64321992-64321302 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 69

Conread position: 77-294
Cow position: chr5:60948360-60948142 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 162

Conread position: 77-314
Cow position: chr5:34914826-34915062 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 90

Conread position: 77-404
Cow position: chr5:70678417-70678747 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 131

Conread position: 77-453
Cow position: chr5:30628925-30629323 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 120

Conread position: 77-502
Cow position: chr5:35969769-35969329 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 193

Conread position: 77-649
Cow position: chr5:44993808-44994406 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 209

Conread position: 77-734
Cow position: chr5:29828279-29827606 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 137

Conread position: 77-737
Cow position: chr5:55232595-55233219 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 30

Conread position: 78-250
Cow position: chr5:29599325-29599493 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 81

Conread position: 78-251
Cow position: chr5:36143205-36143036 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 73

Conread position: 78-273
Cow position: chr5:49821660-49821458 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 139

Conread position: 78-288
Cow position: chr5:26147816-26147606 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 28

Conread position: 78-288
Cow position: chr5:65552493-65552696 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 67

Conread position: 78-291
Cow position: chr5:64060673-64060458 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 134

Conread position: 78-291
Cow position: chr5:70271094-70270879 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 96

Conread position: 78-296
Cow position: chr5:51298488-51298705 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 81

Conread position: 78-299
Cow position: chr5:50824810-50824596 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 76

Conread position: 78-300
Cow position: chr5:39036011-39035783 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 132

Conread position: 78-300
Cow position: chr5:56059837-56060067 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 109

Conread position: 78-300
Cow position: chr5:59626745-59626968 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 115

Conread position: 78-300
Cow position: chr5:59627319-59627103 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 32

Conread position: 78-311
Cow position: chr5:26548916-26549148 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 35, 94

Conread position: 78-311
Cow position: chr5:69383481-69383247 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 97

Conread position: 78-314
Cow position: chr5:46540832-46541066 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 89

Conread position: 78-399
Cow position: chr5:42670645-42670967 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 56

Conread position: 78-403
Cow position: chr5:12902146-12901800 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 78-419
Cow position: chr5:33560511-33560865 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 34, 83

Conread position: 78-422
Cow position: chr5:991701-991332 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 78-442
Cow position: chr5:42050772-42050393 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 38

Conread position: 78-451
Cow position: chr5:46512541-46512930 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 147

Conread position: 78-464
Cow position: chr5:44028083-44028478 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 78-478
Cow position: chr5:5856087-5855689 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 271
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 35, 136

Conread position: 78-510
Cow position: chr5:16025255-16025682 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 68

Conread position: 78-515
Cow position: chr5:72895915-72895466 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 291
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 313

Conread position: 78-520
Cow position: chr5:16937807-16938239 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 81

Conread position: 78-526
Cow position: chr5:53835948-53835478 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 151

Conread position: 78-528
Cow position: chr5:11667957-11668417 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 312
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 340

Conread position: 78-531
Cow position: chr5:35685160-35684692 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 36

Conread position: 78-579
Cow position: chr5:33080581-33081081 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 78-602
Cow position: chr5:65941022-65941566 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 92

Conread position: 78-604
Cow position: chr5:50723275-50722731 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 109

Conread position: 78-647
Cow position: chr5:9893897-9894483 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 94

Conread position: 78-712
Cow position: chr5:55068927-55068297 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 35

Conread position: 78-719
Cow position: chr5:58519189-58519831 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 78-725
Cow position: chr5:57934892-57935543 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 78-734
Cow position: chr5:17086790-17087468 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 157

Conread position: 78-736
Cow position: chr5:47602035-47601362 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 54

Conread position: 78-737
Cow position: chr5:15364097-15363444 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 35

Conread position: 78-740
Cow position: chr5:26467854-26467169 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 78-740
Cow position: chr5:66366737-66366081 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 117

Conread position: 79-247
Cow position: chr5:21721249-21721414 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 79-250
Cow position: chr5:49207103-49207274 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 87

Conread position: 79-295
Cow position: chr5:2240763-2240981 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 184

Conread position: 79-301
Cow position: chr5:45186889-45187115 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 130

Conread position: 79-313
Cow position: chr5:17105071-17104843 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 34, 73

Conread position: 79-371
Cow position: chr5:43403135-43402817 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 79-394
Cow position: chr5:31475910-31475575 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 118

Conread position: 79-422
Cow position: chr5:44446649-44447002 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 67

Conread position: 79-428
Cow position: chr5:57101571-57101916 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 129, 32

Conread position: 79-453
Cow position: chr5:56014948-56014569 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 67

Conread position: 79-458
Cow position: chr5:41009784-41010167 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 34, 110

Conread position: 79-461
Cow position: chr5:65136487-65136110 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 85

Conread position: 79-487
Cow position: chr5:7044480-7044909 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 77

Conread position: 79-511
Cow position: chr5:56028319-56028752 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 81

Conread position: 79-524
Cow position: chr5:25495125-25495573 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 307
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 31, 338

Conread position: 79-524
Cow position: chr5:41165310-41164853 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 318
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 112

Conread position: 79-736
Cow position: chr5:57074111-57074765 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 27

Conread position: 79-740
Cow position: chr5:45845464-45846145 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 79-740
Cow position: chr5:66257862-66257195 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 81

Conread position: 80-273
Cow position: chr5:37842054-37842249 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 94

Conread position: 80-326
Cow position: chr5:73253630-73253386 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 86

Conread position: 80-528
Cow position: chr5:38833339-38832878 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 30

Conread position: 80-540
Cow position: chr5:11229446-11229924 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 47

Conread position: 80-732
Cow position: chr5:35763469-35762846 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 26

Conread position: 80-740
Cow position: chr5:21829089-21828403 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 30

Conread position: 81-698
Cow position: chr5:39094771-39094142 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 105

Conread position: 82-313
Cow position: chr5:66551669-66551907 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 82-740
Cow position: chr5:48829378-48828692 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 108

Conread position: 83-740
Cow position: chr5:37646297-37645613 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 60

Conread position: 84-519
Cow position: chr5:15721867-15722285 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 245, 84

Conread position: 85-737
Cow position: chr5:8023996-8024643 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 9

Conread position: 86-430
Cow position: chr5:70951674-70952018 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 25, 75

Conread position: 86-482
Cow position: chr5:51053429-51053842 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 284
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 26, 121

Conread position: 87-251
Cow position: chr5:34918561-34918398 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 78

Conread position: 87-252
Cow position: chr5:60207923-60207759 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 79

Conread position: 87-308
Cow position: chr5:12873970-12873746 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 89

Conread position: 87-313
Cow position: chr5:60523945-60523723 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 68

Conread position: 87-347
Cow position: chr5:20288040-20288314 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 87-416
Cow position: chr5:49474336-49474670 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 113

Conread position: 87-420
Cow position: chr5:56877688-56877356 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 27, 54

Conread position: 87-421
Cow position: chr5:22667288-22666960 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 83

Conread position: 87-448
Cow position: chr5:35246889-35247271 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 121

Conread position: 87-503
Cow position: chr5:64175912-64176335 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 73

Conread position: 87-509
Cow position: chr5:4280662-4280244 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 292
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 23, 72

Conread position: 87-518
Cow position: chr5:56071076-56070624 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 85

Conread position: 87-522
Cow position: chr5:24996003-24996457 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 47

Conread position: 87-529
Cow position: chr5:25035036-25035467 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 90

Conread position: 87-530
Cow position: chr5:32338743-32339216 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 319
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 26, 8

Conread position: 87-531
Cow position: chr5:40109702-40109259 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 59

Conread position: 87-539
Cow position: chr5:28302538-28302990 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 24

Conread position: 87-616
Cow position: chr5:26990605-26990070 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 352
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 40, 52

Conread position: 87-724
Cow position: chr5:69338032-69337377 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 44

Conread position: 87-734
Cow position: chr5:67932248-67932916 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 155

Conread position: 87-737
Cow position: chr5:16893560-16894219 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 77

Conread position: 87-740
Cow position: chr5:2309340-2310034 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 86

Conread position: 87-740
Cow position: chr5:12322593-12323248 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 59

Conread position: 87-740
Cow position: chr5:30276905-30276249 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 87-740
Cow position: chr5:39447307-39447987 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 606

Conread position: 87-740
Cow position: chr5:74643466-74644113 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 88

Conread position: 87-741
Cow position: chr5:65776159-65776850 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 88-257
Cow position: chr5:60212804-60212632 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 74

Conread position: 88-300
Cow position: chr5:57686526-57686734 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 88-438
Cow position: chr5:12673263-12673610 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 77

Conread position: 88-492
Cow position: chr5:50942943-50943357 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 74

Conread position: 88-740
Cow position: chr5:35208480-35207808 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 151

Conread position: 89-291
Cow position: chr5:55942161-55942367 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 90-300
Cow position: chr5:30233125-30232911 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 91

Conread position: 90-326
Cow position: chr5:4120243-4120001 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 102

Conread position: 90-332
Cow position: chr5:30247310-30247555 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 93

Conread position: 90-395
Cow position: chr5:43370978-43371305 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 123

Conread position: 90-396
Cow position: chr5:37255118-37255439 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 123

Conread position: 90-430
Cow position: chr5:61007279-61006942 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 102, 20

Conread position: 90-448
Cow position: chr5:66582185-66581803 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 211

Conread position: 90-452
Cow position: chr5:11539837-11540208 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 98

Conread position: 90-463
Cow position: chr5:59631702-59631306 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 23, 133

Conread position: 90-519
Cow position: chr5:22242559-22243015 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 44

Conread position: 90-529
Cow position: chr5:32975343-32975791 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 303
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 97

Conread position: 90-531
Cow position: chr5:58144389-58144848 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 303
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 33

Conread position: 90-551
Cow position: chr5:40889080-40889546 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 113

Conread position: 90-636
Cow position: chr5:32153096-32153664 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 215

Conread position: 90-661
Cow position: chr5:47316760-47317342 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 20

Conread position: 90-672
Cow position: chr5:60209931-60210524 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 71

Conread position: 90-710
Cow position: chr5:26132880-26133497 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 101

Conread position: 90-730
Cow position: chr5:14314731-14314080 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 94

Conread position: 90-740
Cow position: chr5:63647262-63647920 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 80

Conread position: 90-742
Cow position: chr5:14550367-14551033 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 113

Conread position: 90-746
Cow position: chr5:62172613-62171947 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 23

Conread position: 91-462
Cow position: chr5:17767939-17768318 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 27, 73

Conread position: 92-741
Cow position: chr5:26097503-26096842 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 115

Conread position: 93-257
Cow position: chr5:60741457-60741290 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 119

Conread position: 93-300
Cow position: chr5:72006285-72006487 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 93-314
Cow position: chr5:62812039-62811813 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 105

Conread position: 93-379
Cow position: chr5:33834252-33833953 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 110

Conread position: 93-407
Cow position: chr5:49920138-49919805 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 91

Conread position: 93-448
Cow position: chr5:45397777-45397418 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 75

Conread position: 93-519
Cow position: chr5:30253952-30253515 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 50

Conread position: 93-531
Cow position: chr5:55966661-55967125 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 417

Conread position: 93-547
Cow position: chr5:34050320-34049851 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 321
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 70

Conread position: 93-552
Cow position: chr5:17999284-17999760 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 314
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 112

Conread position: 93-558
Cow position: chr5:20779187-20779646 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 318
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 20, 69

Conread position: 93-567
Cow position: chr5:12351600-12352061 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 93-589
Cow position: chr5:58718-59225 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 93-731
Cow position: chr5:45706248-45705587 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 98

Conread position: 93-740
Cow position: chr5:50600258-50599618 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 77

Conread position: 94-327
Cow position: chr5:56548777-56548550 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 65

Conread position: 94-399
Cow position: chr5:60016375-60016056 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 71

Conread position: 94-457
Cow position: chr5:74580997-74580623 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 19, 8

Conread position: 95-464
Cow position: chr5:6286242-6286603 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 205, 16

Conread position: 95-736
Cow position: chr5:44053836-44054483 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 86

Conread position: 96-311
Cow position: chr5:59330530-59330747 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 209

Conread position: 96-404
Cow position: chr5:61999347-61999658 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 117

Conread position: 96-478
Cow position: chr5:69461541-69461144 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 14

Conread position: 96-482
Cow position: chr5:45409534-45409131 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 267
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 117

Conread position: 96-737
Cow position: chr5:35826807-35826150 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 67

Conread position: 96-754
Cow position: chr5:24349299-24348657 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 15

Conread position: 97-596
Cow position: chr5:65753068-65752551 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 97

Conread position: 98-257
Cow position: chr5:55162835-55162672 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 115

Conread position: 98-295
Cow position: chr5:52136845-52137046 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 115

Conread position: 98-311
Cow position: chr5:17834951-17835164 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 115

Conread position: 98-329
Cow position: chr5:33918496-33918726 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 115

Conread position: 98-503
Cow position: chr5:5202110-5201701 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 269
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 75

Conread position: 98-520
Cow position: chr5:64137465-64137020 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 291
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 15, 116

Conread position: 98-570
Cow position: chr5:60952869-60952380 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 327
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 115

Conread position: 98-573
Cow position: chr5:61576754-61576255 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 335
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 93

Conread position: 98-594
Cow position: chr5:3282044-3281525 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 114

Conread position: 98-736
Cow position: chr5:23140381-23141026 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 98-740
Cow position: chr5:27179872-27179206 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 92

Conread position: 99-291
Cow position: chr5:46704094-46704287 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 67

Conread position: 99-408
Cow position: chr5:57419590-57419913 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 63

Conread position: 99-591
Cow position: chr5:6503670-6504169 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 114

Conread position: 101-291
Cow position: chr5:38169094-38168906 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 102-429
Cow position: chr5:64026812-64027149 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 204

Conread position: 102-465
Cow position: chr5:57265699-57266075 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 89

Conread position: 102-477
Cow position: chr5:57591884-57591501 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 8

Conread position: 102-740
Cow position: chr5:5938529-5937871 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 113

Conread position: 102-740
Cow position: chr5:18702021-18702655 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 104-669
Cow position: chr5:12149748-12149164 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 86

Conread position: 104-740
Cow position: chr5:47703924-47704588 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 59

Conread position: 108-740
Cow position: chr5:59081997-59082645 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 107

Conread position: 109-453
Cow position: chr5:65967539-65967897 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 184, 60

Conread position: 109-478
Cow position: chr5:71158087-71158454 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 239
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 78

Conread position: 109-552
Cow position: chr5:64139751-64139299 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 109-596
Cow position: chr5:45170552-45170053 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 63

Conread position: 115-499
Cow position: chr5:71495010-71494606 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 265
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 96

Conread position: 116-327
Cow position: chr5:17602018-17602231 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 161, 136

Conread position: 117-736
Cow position: chr5:7193599-7192987 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 41

Conread position: 127-520
Cow position: chr5:12710056-12709655 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 175, 56

Conread position: 132-543
Cow position: chr5:26370857-26370453 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 282
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 57

Conread position: 136-327
Cow position: chr5:61102883-61102684 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 133

Conread position: 136-531
Cow position: chr5:27306473-27306076 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 270
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 99

Conread position: 136-570
Cow position: chr5:63987280-63987729 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 27

Conread position: 136-574
Cow position: chr5:50533221-50533667 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 65

Conread position: 136-638
Cow position: chr5:34887026-34887548 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 59

Conread position: 139-406
Cow position: chr5:19524066-19523779 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 72

Conread position: 139-586
Cow position: chr5:33662012-33661556 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 72

Conread position: 140-531
Cow position: chr5:54350200-54350603 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 36

Conread position: 141-477
Cow position: chr5:7755404-7755742 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 70

Conread position: 143-388
Cow position: chr5:73418129-73418382 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 126

Conread position: 143-729
Cow position: chr5:26094008-26094612 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 35

Conread position: 144-350
Cow position: chr5:56338862-56339074 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 172, 202

Conread position: 144-418
Cow position: chr5:44726176-44726456 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 14

Conread position: 144-472
Cow position: chr5:61810928-61810608 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 185, 32

Conread position: 144-482
Cow position: chr5:23168667-23169013 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 154, 287

Conread position: 144-641
Cow position: chr5:67212519-67212028 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 38

Conread position: 144-729
Cow position: chr5:50821946-50821347 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 307

Conread position: 144-739
Cow position: chr5:46509707-46510320 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 27

Conread position: 144-740
Cow position: chr5:4166801-4166219 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 65

Conread position: 144-740
Cow position: chr5:9089869-9090458 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 52

Conread position: 145-531
Cow position: chr5:43929578-43929976 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 155, 107

Conread position: 146-736
Cow position: chr5:39299689-39299078 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 148-407
Cow position: chr5:49440721-49440991 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 151, 29

Conread position: 148-737
Cow position: chr5:41545740-41546341 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 28

Conread position: 149-740
Cow position: chr5:25230865-25231461 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 49

Conread position: 164-520
Cow position: chr5:7723804-7723441 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 234
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 128, 171

Conread position: 202-503
Cow position: chr5:33537969-33537676 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 125

Conread position: 203-730
Cow position: chr5:65932843-65933376 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 85

Conread position: 205-740
Cow position: chr5:6045394-6044833 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 303

Conread position: 206-530
Cow position: chr5:42744878-42744556 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 94, 22

Conread position: 207-431
Cow position: chr5:20422097-20422322 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 101, 36

Conread position: 209-515
Cow position: chr5:71454518-71454822 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 25

Conread position: 209-631
Cow position: chr5:20783716-20783284 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 211-420
Cow position: chr5:45273409-45273633 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 211-430
Cow position: chr5:65883680-65883918 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 211-448
Cow position: chr5:46425763-46426011 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 211-468
Cow position: chr5:14629718-14629994 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 91, 264

Conread position: 211-477
Cow position: chr5:48009767-48010036 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 117, 66

Conread position: 211-482
Cow position: chr5:57575865-57575571 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 211-501
Cow position: chr5:57737191-57736899 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 90, 214

Conread position: 211-502
Cow position: chr5:45804152-45803847 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 81, 243

Conread position: 211-523
Cow position: chr5:72006773-72007087 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 24

Conread position: 211-540
Cow position: chr5:65601549-65601209 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 285

Conread position: 211-558
Cow position: chr5:31640517-31640159 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 166

Conread position: 211-603
Cow position: chr5:5110982-5111392 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 200

Conread position: 211-737
Cow position: chr5:20407586-20408108 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 126

Conread position: 211-740
Cow position: chr5:32696731-32697238 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 214-740
Cow position: chr5:56467780-56467252 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 87

Conread position: 216-733
Cow position: chr5:19813133-19813667 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 134

Conread position: 216-754
Cow position: chr5:15598148-15598698 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 197

Conread position: 217-399
Cow position: chr5:7698086-7697894 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 218-736
Cow position: chr5:31144702-31145225 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 176

Conread position: 220-740
Cow position: chr5:34638967-34638440 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 213

Conread position: 224-740
Cow position: chr5:27155096-27154571 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 80

Conread position: 225-640
Cow position: chr5:32140630-32141051 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 249

Conread position: 225-737
Cow position: chr5:70101745-70102255 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 104

Conread position: 227-478
Cow position: chr5:35449312-35449063 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 98, 78

Conread position: 235-740
Cow position: chr5:64823243-64823755 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 184

Conread position: 247-521
Cow position: chr5:3627096-3627400 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 270

Conread position: 253-616
Cow position: chr5:34916181-34915813 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 186

Conread position: 261-734
Cow position: chr5:27015722-27015246 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 214

Conread position: 270-740
Cow position: chr5:49821173-49820689 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 177

Conread position: 329-737
Cow position: chr5:16509056-16508636 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 89

Conread position: 332-531
Cow position: chr5:32963674-32963871 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 75, 45

Conread position: 332-637
Cow position: chr5:28927632-28927946 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 157

Conread position: 332-737
Cow position: chr5:55176847-55176436 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 156

Conread position: 338-499
Cow position: chr5:40039820-40039981 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 62

Conread position: 338-626
Cow position: chr5:60520112-60519837 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 338-635
Cow position: chr5:51357550-51357849 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 151

Conread position: 339-501
Cow position: chr5:57271316-57271478 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 94

Conread position: 339-503
Cow position: chr5:35235760-35235923 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 18

Conread position: 339-515
Cow position: chr5:56820313-56820486 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 339-522
Cow position: chr5:45036970-45036787 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 28

Conread position: 339-528
Cow position: chr5:56433753-56433562 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 151

Conread position: 339-531
Cow position: chr5:52000171-51999977 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 93, 148

Conread position: 339-574
Cow position: chr5:50950503-50950267 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 148

Conread position: 339-579
Cow position: chr5:68604807-68604562 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 181, 145

Conread position: 339-588
Cow position: chr5:72150196-72149951 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 160, 91

Conread position: 339-600
Cow position: chr5:63917461-63917716 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 146

Conread position: 339-628
Cow position: chr5:47313425-47313133 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 95

Conread position: 339-649
Cow position: chr5:69099481-69099165 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 339-661
Cow position: chr5:23856212-23856535 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 339-705
Cow position: chr5:47888760-47889133 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 153

Conread position: 339-739
Cow position: chr5:46122401-46122766 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 94

Conread position: 339-740
Cow position: chr5:16185036-16184639 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 90

Conread position: 340-523
Cow position: chr5:28324302-28324111 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 63, 151

Conread position: 341-580
Cow position: chr5:23666311-23666550 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 146

Conread position: 342-654
Cow position: chr5:73222636-73222335 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 86, 144

Conread position: 344-677
Cow position: chr5:44583184-44583504 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 63

Conread position: 344-740
Cow position: chr5:3280927-3281320 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 56

Show alignments to all cow chromosomes.