Cow genome map

Conread name: Lng1-LNG010075F05

Conread position: 40-389
Cow position: chr1:90978521-90978181 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 19

Conread position: 43-497
Cow position: chr1:82422593-82423038 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 101

Conread position: 48-207
Cow position: chr1:22590329-22590490 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 48-316
Cow position: chr1:57822713-57822460 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 84, 30

Conread position: 49-458
Cow position: chr1:81468824-81469228 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 7

Conread position: 55-267
Cow position: chr1:63199505-63199291 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 22

Conread position: 58-380
Cow position: chr1:89399293-89398971 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 186

Conread position: 58-391
Cow position: chr1:100436764-100437112 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 7

Conread position: 58-504
Cow position: chr1:67905251-67905687 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 21

Conread position: 60-427
Cow position: chr1:89093950-89093580 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 25, 19

Conread position: 62-312
Cow position: chr1:5762234-5762488 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 20

Conread position: 64-305
Cow position: chr1:80192803-80193052 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 184

Conread position: 65-414
Cow position: chr1:93430045-93429694 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 164

Conread position: 66-456
Cow position: chr1:102311835-102311437 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 270
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 69, 181

Conread position: 67-487
Cow position: chr1:1777887-1778311 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 252

Conread position: 67-487
Cow position: chr1:22607436-22607866 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 21

Conread position: 67-490
Cow position: chr1:7435200-7434765 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 73

Conread position: 67-504
Cow position: chr1:93441233-93440787 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 71

Conread position: 68-221
Cow position: chr1:89934963-89935117 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 25

Conread position: 69-342
Cow position: chr1:70106611-70106338 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 43, 53

Conread position: 69-360
Cow position: chr1:47194802-47195081 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 13

Conread position: 69-455
Cow position: chr1:11056027-11056408 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 111

Conread position: 69-499
Cow position: chr1:89938874-89939311 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 316

Conread position: 70-234
Cow position: chr1:91981162-91980995 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 47

Conread position: 70-259
Cow position: chr1:96313562-96313376 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 117, 135

Conread position: 70-264
Cow position: chr1:100716223-100716039 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 70-375
Cow position: chr1:90072776-90073079 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 173

Conread position: 70-382
Cow position: chr1:62197213-62197532 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 117, 203

Conread position: 70-384
Cow position: chr1:58049890-58050191 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 127, 47

Conread position: 70-394
Cow position: chr1:83789779-83790095 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 96

Conread position: 70-414
Cow position: chr1:101656939-101657279 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 143

Conread position: 70-455
Cow position: chr1:6971390-6971027 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 65, 160

Conread position: 70-461
Cow position: chr1:82420191-82420580 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 55

Conread position: 70-504
Cow position: chr1:91995359-91994935 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 71-311
Cow position: chr1:93438726-93438979 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 71-316
Cow position: chr1:93128883-93129131 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 173

Conread position: 71-389
Cow position: chr1:76118077-76117761 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 88

Conread position: 71-396
Cow position: chr1:28470098-28469774 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 39

Conread position: 71-420
Cow position: chr1:60452163-60452516 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 172

Conread position: 71-438
Cow position: chr1:6971602-6971979 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 37

Conread position: 71-448
Cow position: chr1:93579651-93580021 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 71-473
Cow position: chr1:17467285-17467692 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 178

Conread position: 71-492
Cow position: chr1:22442308-22442728 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 48

Conread position: 71-492
Cow position: chr1:22605379-22605788 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 104

Conread position: 71-497
Cow position: chr1:69239776-69240210 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 23

Conread position: 72-237
Cow position: chr1:68472038-68471867 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 72-256
Cow position: chr1:26439343-26439159 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 117, 168

Conread position: 72-316
Cow position: chr1:80187616-80187374 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 167

Conread position: 72-387
Cow position: chr1:31116828-31117138 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 147

Conread position: 72-419
Cow position: chr1:17440122-17440459 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 34

Conread position: 72-420
Cow position: chr1:79931425-79931084 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 73-273
Cow position: chr1:60785540-60785741 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 92

Conread position: 73-447
Cow position: chr1:93571382-93571758 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 169

Conread position: 73-470
Cow position: chr1:91976989-91977390 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 129

Conread position: 73-477
Cow position: chr1:24230085-24229691 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 73-479
Cow position: chr1:3103506-3103089 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 10, 178

Conread position: 74-231
Cow position: chr1:39066559-39066720 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 74-354
Cow position: chr1:8692755-8693035 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 165

Conread position: 74-409
Cow position: chr1:2530111-2529773 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 172

Conread position: 74-451
Cow position: chr1:78728898-78728520 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 31

Conread position: 74-454
Cow position: chr1:76660183-76660574 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 169

Conread position: 74-479
Cow position: chr1:4269637-4269232 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 170

Conread position: 75-301
Cow position: chr1:100999948-101000174 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 68

Conread position: 75-357
Cow position: chr1:90862431-90862145 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 170

Conread position: 75-497
Cow position: chr1:80303464-80303868 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 288

Conread position: 76-350
Cow position: chr1:66401857-66401582 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 42

Conread position: 82-446
Cow position: chr1:46241386-46241757 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 169

Conread position: 94-414
Cow position: chr1:5376931-5376621 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 26, 84

Conread position: 102-402
Cow position: chr1:90971615-90971912 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 144

Conread position: 103-361
Cow position: chr1:70310161-70309899 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 142

Conread position: 106-384
Cow position: chr1:30087162-30087447 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 173

Conread position: 124-504
Cow position: chr1:96142693-96142314 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 155

Conread position: 125-461
Cow position: chr1:8319364-8319036 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 108

Conread position: 134-497
Cow position: chr1:82419425-82419786 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 112

Conread position: 155-353
Cow position: chr1:64729180-64729380 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 33, 87

Conread position: 179-410
Cow position: chr1:69346300-69346062 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 201-393
Cow position: chr1:14382754-14382567 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 5, 26

Conread position: 243-424
Cow position: chr1:57892905-57893081 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 243-492
Cow position: chr1:39066947-39067189 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 243-501
Cow position: chr1:65635928-65635685 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 142, 79

Conread position: 256-430
Cow position: chr1:10768650-10768477 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 149, 17

Conread position: 259-416
Cow position: chr1:96313229-96313072 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 261-420
Cow position: chr1:60785963-60786120 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 261-484
Cow position: chr1:30068927-30068706 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 147, 195

Conread position: 262-419
Cow position: chr1:22659878-22659723 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 267-410
Cow position: chr1:44128873-44129015 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 295-479
Cow position: chr1:69382353-69382539 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 93

Conread position: 333-507
Cow position: chr1:63199028-63198864 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 350-497
Cow position: chr1:26438744-26438597 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 358-503
Cow position: chr1:64730383-64730528 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 370-504
Cow position: chr1:91980416-91980284 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 53

Show alignments to all cow chromosomes.