Cow genome map


           Conread name:
           Lng1-LNG010075F05
        

               Conread position:
               40-389
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               43-497
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               48-207
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               48-316
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               49-458
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 7
               

               Conread position:
               55-267
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               58-380
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 186
               

               Conread position:
               58-391
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               58-504
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 21
               

               Conread position:
               60-427
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               62-312
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               64-305
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               104, 184
               

               Conread position:
               65-414
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 164
               

               Conread position:
               66-456
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               270
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               69, 181
               

               Conread position:
               67-487
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 252
               

               Conread position:
               67-487
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               67-490
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 73
               

               Conread position:
               67-504
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 71
               

               Conread position:
               68-221
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 25
               

               Conread position:
               69-342
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               69-360
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               69-455
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               69-499
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 316
               

               Conread position:
               70-234
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               117, 47
               

               Conread position:
               70-259
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               117, 135
               

               Conread position:
               70-264
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               70-375
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               49, 173
               

               Conread position:
               70-382
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               117, 203
               

               Conread position:
               70-384
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               70-394
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 96
               

               Conread position:
               70-414
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 143
               

               Conread position:
               70-455
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               272
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               65, 160
               

               Conread position:
               70-461
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               70-504
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               71-311
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               71-316
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               43, 173
               

               Conread position:
               71-389
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 88
               

               Conread position:
               71-396
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 39
               

               Conread position:
               71-420
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 172
               

               Conread position:
               71-438
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               49, 37
               

               Conread position:
               71-448
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               71-473
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 178
               

               Conread position:
               71-492
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               71-492
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 104
               

               Conread position:
               71-497
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 23
               

               Conread position:
               72-237
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               72-256
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               117, 168
               

               Conread position:
               72-316
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               45, 167
               

               Conread position:
               72-387
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 147
               

               Conread position:
               72-419
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 34
               

               Conread position:
               72-420
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 171
               

               Conread position:
               73-273
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               73-447
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 169
               

               Conread position:
               73-470
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               73-477
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               73-479
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               290
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               10, 178
               

               Conread position:
               74-231
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               74-354
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               7, 165
               

               Conread position:
               74-409
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 172
               

               Conread position:
               74-451
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               74-454
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 169
               

               Conread position:
               74-479
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 170
               

               Conread position:
               75-301
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               75-357
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 170
               

               Conread position:
               75-497
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 288
               

               Conread position:
               76-350
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               82-446
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 169
               

               Conread position:
               94-414
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               102-402
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 144
               

               Conread position:
               103-361
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 142
               

               Conread position:
               106-384
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 173
               

               Conread position:
               124-504
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               125-461
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               49, 108
               

               Conread position:
               134-497
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               155-353
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               33, 87
               

               Conread position:
               179-410
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               201-393
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               5, 26
               

               Conread position:
               243-424
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               243-492
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               243-501
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               142, 79
               

               Conread position:
               256-430
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               149, 17
               

               Conread position:
               259-416
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               261-420
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               261-484
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               147, 195
               

               Conread position:
               262-419
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               267-410
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               295-479
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 93
               

               Conread position:
               333-507
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               350-497
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               358-503
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               370-504
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 53
               
Show alignments to all cow chromosomes.