Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 49-307 |
| Cow position: | chr10:27754206-27753967 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 86, 6 |
| Conread position: | 49-308 |
| Cow position: | chr10:67156391-67156648 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 55-431 |
| Cow position: | chr10:52670592-52670973 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 57-408 |
| Cow position: | chr10:55103479-55103139 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 57-443 |
| Cow position: | chr10:41118643-41118257 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 186 |
| Conread position: | 58-374 |
| Cow position: | chr10:25502907-25503221 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 58-428 |
| Cow position: | chr10:31164611-31164255 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 61-304 |
| Cow position: | chr10:50564700-50564458 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 6 |
| Conread position: | 61-391 |
| Cow position: | chr10:29707205-29706880 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 18 |
| Conread position: | 61-418 |
| Cow position: | chr10:9109175-9108819 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 64-438 |
| Cow position: | chr10:16979662-16980021 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 65-405 |
| Cow position: | chr10:50463281-50463614 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 66-504 |
| Cow position: | chr10:58685139-58684705 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 158 |
| Conread position: | 67-366 |
| Cow position: | chr10:39612370-39612059 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 115, 90 |
| Conread position: | 67-391 |
| Cow position: | chr10:9372302-9371986 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 67-497 |
| Cow position: | chr10:60963074-60963517 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 68-487 |
| Cow position: | chr10:34730518-34730093 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 69-225 |
| Cow position: | chr10:9117921-9117761 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 119, 55 |
| Conread position: | 69-407 |
| Cow position: | chr10:26288876-26289218 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 177 |
| Conread position: | 70-337 |
| Cow position: | chr10:15168507-15168231 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 70-375 |
| Cow position: | chr10:57076882-57077194 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 117, 48 |
| Conread position: | 70-438 |
| Cow position: | chr10:3826230-3825855 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 71-404 |
| Cow position: | chr10:16900150-16899816 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 71-410 |
| Cow position: | chr10:56916753-56916407 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 180 |
| Conread position: | 71-434 |
| Cow position: | chr10:14894649-14894295 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 71-451 |
| Cow position: | chr10:50565864-50565482 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 173 |
| Conread position: | 71-504 |
| Cow position: | chr10:21010509-21010918 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 76 |
| Conread position: | 72-207 |
| Cow position: | chr10:67883694-67883557 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 72-278 |
| Cow position: | chr10:53821879-53822087 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 115, 170 |
| Conread position: | 72-479 |
| Cow position: | chr10:55116618-55116224 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 105 |
| Conread position: | 73-209 |
| Cow position: | chr10:9884933-9884797 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 73-419 |
| Cow position: | chr10:48450348-48450685 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 73-434 |
| Cow position: | chr10:3873781-3873418 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 149 |
| Conread position: | 73-438 |
| Cow position: | chr10:16699232-16698865 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 171 |
| Conread position: | 73-444 |
| Cow position: | chr10:41269785-41269412 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 8, 143 |
| Conread position: | 73-449 |
| Cow position: | chr10:14606101-14606463 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 51 |
| Conread position: | 73-487 |
| Cow position: | chr10:21341439-21341022 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 73-504 |
| Cow position: | chr10:69632507-69632923 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 162 |
| Conread position: | 74-204 |
| Cow position: | chr10:14608073-14607941 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 74-280 |
| Cow position: | chr10:49356417-49356206 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 74-326 |
| Cow position: | chr10:27254195-27253944 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 74-446 |
| Cow position: | chr10:41266089-41265714 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 28 |
| Conread position: | 75-414 |
| Cow position: | chr10:23451482-23451826 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 157 |
| Conread position: | 75-420 |
| Cow position: | chr10:64208803-64208460 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 6, 36 |
| Conread position: | 82-315 |
| Cow position: | chr10:41281702-41281467 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 87, 160 |
| Conread position: | 82-457 |
| Cow position: | chr10:23075253-23074880 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 82-477 |
| Cow position: | chr10:9372712-9372316 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 162 |
| Conread position: | 84-419 |
| Cow position: | chr10:30615792-30615444 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 94-487 |
| Cow position: | chr10:55143350-55142958 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 95-435 |
| Cow position: | chr10:65206090-65205748 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 40, 151 |
| Conread position: | 105-504 |
| Cow position: | chr10:55117989-55117570 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 121-504 |
| Cow position: | chr10:14615205-14615589 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 146-458 |
| Cow position: | chr10:59524715-59524393 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 190-455 |
| Cow position: | chr10:9883185-9882937 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 215-387 |
| Cow position: | chr10:38835341-38835173 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 261-456 |
| Cow position: | chr10:36297645-36297841 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 270-487 |
| Cow position: | chr10:53822295-53822502 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 329-504 |
| Cow position: | chr10:15167809-15167638 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.