Cow genome map
| Conread name: | Lng1-LNG010075F05 |
| Conread position: | 36-453 |
| Cow position: | chr11:14191179-14191595 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 5 |
| Conread position: | 48-225 |
| Cow position: | chr11:68168631-68168815 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 48-461 |
| Cow position: | chr11:18138970-18139373 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 296 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 56-390 |
| Cow position: | chr11:30923145-30923476 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 113, 61 |
| Conread position: | 58-221 |
| Cow position: | chr11:7475435-7475602 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 59 |
| Conread position: | 58-479 |
| Cow position: | chr11:83086870-83086457 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 61-391 |
| Cow position: | chr11:7005797-7005464 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 62-435 |
| Cow position: | chr11:86667381-86667009 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 63-307 |
| Cow position: | chr11:9757744-9757988 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 63-383 |
| Cow position: | chr11:68236742-68237065 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 63-436 |
| Cow position: | chr11:12320438-12320817 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 371 |
| Conread position: | 63-497 |
| Cow position: | chr11:48058993-48059405 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 65-492 |
| Cow position: | chr11:75129441-75129866 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 67-451 |
| Cow position: | chr11:64035452-64035075 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 120 |
| Conread position: | 67-490 |
| Cow position: | chr11:36397529-36397117 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 152 |
| Conread position: | 67-505 |
| Cow position: | chr11:65752846-65753293 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 33 |
| Conread position: | 68-397 |
| Cow position: | chr11:9715532-9715859 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 101, 49 |
| Conread position: | 68-448 |
| Cow position: | chr11:32075922-32075558 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 52, 111 |
| Conread position: | 68-504 |
| Cow position: | chr11:12336129-12336575 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 69-390 |
| Cow position: | chr11:31770855-31771171 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 119, 51 |
| Conread position: | 69-420 |
| Cow position: | chr11:58355909-58355580 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 69-420 |
| Cow position: | chr11:61469760-61469405 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 175 |
| Conread position: | 69-449 |
| Cow position: | chr11:8557543-8557172 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 70-443 |
| Cow position: | chr11:58355096-58354739 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 170 |
| Conread position: | 70-479 |
| Cow position: | chr11:3612743-3612350 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 87 |
| Conread position: | 70-479 |
| Cow position: | chr11:71161521-71161931 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 176 |
| Conread position: | 70-492 |
| Cow position: | chr11:59989102-59989537 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 70-497 |
| Cow position: | chr11:32770779-32770359 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 71 |
| Conread position: | 71-350 |
| Cow position: | chr11:31348691-31348408 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 71-354 |
| Cow position: | chr11:2069142-2068860 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 64, 167 |
| Conread position: | 71-392 |
| Cow position: | chr11:75202211-75202530 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 71-434 |
| Cow position: | chr11:30474308-30473939 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 175 |
| Conread position: | 71-455 |
| Cow position: | chr11:19228540-19228163 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 109 |
| Conread position: | 71-461 |
| Cow position: | chr11:18179762-18180132 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 71-481 |
| Cow position: | chr11:59969897-59969480 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 92 |
| Conread position: | 72-207 |
| Cow position: | chr11:60249209-60249072 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 72-263 |
| Cow position: | chr11:35745922-35745733 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 115, 15 |
| Conread position: | 72-263 |
| Cow position: | chr11:40582189-40582385 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 173 |
| Conread position: | 72-391 |
| Cow position: | chr11:14678335-14678027 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 98 |
| Conread position: | 72-424 |
| Cow position: | chr11:63283500-63283153 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 88 |
| Conread position: | 72-433 |
| Cow position: | chr11:83551884-83551534 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 49 |
| Conread position: | 73-348 |
| Cow position: | chr11:81347587-81347861 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 73-434 |
| Cow position: | chr11:85702023-85701657 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 73-435 |
| Cow position: | chr11:3744145-3743778 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 174 |
| Conread position: | 74-221 |
| Cow position: | chr11:70695178-70695028 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 74-387 |
| Cow position: | chr11:7066589-7066911 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 165 |
| Conread position: | 76-423 |
| Cow position: | chr11:63667352-63667008 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 168 |
| Conread position: | 82-394 |
| Cow position: | chr11:31816297-31815987 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 92, 157 |
| Conread position: | 82-395 |
| Cow position: | chr11:45492755-45492421 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 53, 176 |
| Conread position: | 84-467 |
| Cow position: | chr11:55183328-55183711 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 89-277 |
| Cow position: | chr11:40511816-40512007 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 80, 154 |
| Conread position: | 89-486 |
| Cow position: | chr11:37328507-37328126 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 122-450 |
| Cow position: | chr11:50040803-50040471 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 179-487 |
| Cow position: | chr11:11396771-11396464 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 9, 54 |
| Conread position: | 191-454 |
| Cow position: | chr11:6753025-6752767 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 206-461 |
| Cow position: | chr11:37318589-37318336 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 212-394 |
| Cow position: | chr11:30220481-30220300 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 214-504 |
| Cow position: | chr11:48074274-48073992 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 243-432 |
| Cow position: | chr11:66494647-66494457 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 243-514 |
| Cow position: | chr11:41226055-41226327 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 246-504 |
| Cow position: | chr11:70694309-70694050 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 253-456 |
| Cow position: | chr11:81837803-81837600 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 186, 175 |
| Conread position: | 265-431 |
| Cow position: | chr11:40582524-40582682 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 273-503 |
| Cow position: | chr11:31349096-31348876 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 280-461 |
| Cow position: | chr11:6887063-6887245 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 284-487 |
| Cow position: | chr11:31815463-31815264 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 291-494 |
| Cow position: | chr11:68169405-68169603 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 300-503 |
| Cow position: | chr11:7066364-7066572 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.